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Record W3136721216 · doi:10.1101/2021.03.13.434266

Dissolved oxygen minimally affects magnetic susceptibility in biologically relevant conditions

2021· preprint· en· W3136721216 on OpenAlexafffund
Véronique Fortier, Ives R. Levesque

Bibliographic record

VenuebioRxiv (Cold Spring Harbor Laboratory) · 2021
Typepreprint
Languageen
FieldMedicine
TopicAdvanced MRI Techniques and Applications
Canadian institutionsMcGill University Health CentreMcGill University
FundersNatural Sciences and Engineering Research Council of CanadaFondation de l'Hôpital Général de MontréalTechnische Universität MünchenMcGill UniversityMcGill University Health CentreHarvard University
KeywordsQuantitative susceptibility mappingMagnetic susceptibilityImaging phantomChemistryParamagnetismOxygenAtmospheric pressureAnalytical Chemistry (journal)Nuclear magnetic resonanceChromatographyMagnetic resonance imagingOrganic chemistry

Abstract

fetched live from OpenAlex

Abstract Purpose To investigate the potential of quantitative susceptibility mapping (QSM) with MRI as a biomarker for tissue oxygenation in fat-water mixture. Oxygen molecules (O 2 ) are paramagnetic. This suggests that dissolved O 2 in tissue should affect the measured magnetic susceptibility. However, direct measurements of dissolved O 2 in tissues is challenging with QSM as the induced change in susceptibility is below the sensitivity of existing algorithms. QSM in regions that contain fat could be sensitive enough to be used as a marker of tissue oxygenation as oxygen has a larger solubility in fat than in water. Methods The relationship between dissolved O 2 concentration and magnetic susceptibility was investigated based on MRI measurements using phantoms made of fat-water emulsions. Dairy cream was used to approximate fat-containing biological tissues. Phantoms based on dairy cream with 35 % fat were designed with controlled concentrations of dissolved O 2 . O 2 was bubbled into the dairy cream to reach O 2 concentrations above the concentration at atmospheric pressure, while nitrogen was bubbled in cream to obtain O 2 concentrations below atmospheric pressure. Magnetic susceptibility was expected to increase, becoming more paramagnetic, as O 2 concentration was increased. Results Magnetic susceptibility from MRI-based QSM measurements did not reveal a dependence on O 2 concentration in fat-water mixture phantoms. The relationship between susceptibility and O 2 was weak and inconsistent among the various phantom experiments. Conclusion QSM in fat-water mixture appears to be minimally sensitive to dissolved O 2 based on phantom experiments. This suggests that QSM is not likely to be sensitive enough to be proposed as a marker for tissue oxygenation, as the change in magnetic susceptibility induced by the change in dissolved O 2 concentration is below the current detection limit, even in the presence of fat.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.002
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.001
Threshold uncertainty score0.004

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.002
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.001
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0010.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.017
GPT teacher head0.270
Teacher spread0.253 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2021
Admission routes2
Has abstractyes

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