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Record W3147227305

FIRST REPORT OF IMPATIENS NECROTIC SPOT VIRUS INFECTING ISOTOMA AXILLARIS LIDT.

2010· article· en· W3147227305 on OpenAlexaboutno aff
Maria Grazia Bellardi, Lisa Cavicchi, M. Pirini Casadei, V. Vicchi, G. Bozzano

Bibliographic record

VenueArchivio istituzionale della ricerca (Alma Mater Studiorum Università di Bologna) · 2010
Typearticle
Languageen
FieldAgricultural and Biological Sciences
TopicPlant Virus Research Studies
Canadian institutionsnot available
Fundersnot available
KeywordsVirologyBiologyVirus
DOInot available

Abstract

fetched live from OpenAlex

Isotoma axillaris Lidt. (sin. Laurentia axillaris; also known as blue stars or rock isotome) is a perennial species of Campanulaceae native to Australia, typically cultivated as annual in Liguria region. Leaves are ovate or obvate in outline, with pinnatified lamina; solitary flowers bloom in April-May at the leaf axils. In 2011, severe symptoms resembling those caused by tospoviruses occurred in an ornamental farm located at Albenga area (Savona). Small necrotic concentric rings and necrosis of leaf lamina were present in almost 7% of plot blooming plants grown outdoors. Twenty symptomatic plants collected during inspections were maintained in insect-proof greenhouse at Bologna University. Virus was isolated by mechanical transmission to Chenopodiaceae species. Symptomatic I. axillaris was negative for Tomato spotted wilt virus and positive for Impatiens necrotic spot virus (INSV) in DAS-ELISA tests. To further confirm the presence of INSV, total RNA was extracted and used for RT-PCR. Nucleotide sequences obtained were found to be closely related to published sequences (98% nucleotide identity with INSV available under GenBank Accession Nos DQ523598, L20886, AB109100, and L20885). To now, INSV has been found in 1991 naturally infecting I. fluviatilis (sin. L. fluviatilis), another species of Isotoma, weed in Canada. Our finding is thought to be the first report of natural occurrence of INSV in I. axillaris. Investigations of the ornamental farm looking for thrips vector of INSV were performed and many populations were found, suggesting that thrips are the main responsible for INSV spreading as well as increasing of its natural hosts. \n \nFIRST REPORT OF HOSTA VIRUS X (HVX) INFECTING HOSTA IN ITALY \n \nBellardi M.G.1, Cavicchi L.2 and Davino S.3 \n \n 1 DiSTA-Patologia Vegetale, Alma Mater Studiorum, Università di Bologna, Viale G. Fanin 42, 40127 Bologna, Italy. \n 2 Plesso Didattico G. Scarabelli, Alma Mater Studiorum, Università di Bologna, Viale G. Ascari 17, 40026 Imola, Bologna, Italy. \n3 SENFIMIZO, Sez. di Patologia Vegetale e Microbiologia agraria, Università degli Studi di Palermo, Viale delle Scienze edificio 5, 90128 Palermo, Italy. \n E-mail: mariagrazia.bellardi@unibo.it \n \nSpecies of Hosta (Liliaceae) are herbaceous perennials more often grown for their foliage (blue, gold, green or variegated) then for their flowers. Virus diseases reported elsewhere in the word on cultivated hosta species include Hosta virus X (HVX), first described in USA in 1996, and considered to be the main pathogen of this genus. In October of 2010, the following systemic virus-like symptoms were observed on leaves of three varieties cultivated in Emilia-Romagna region (Italy) (“Gold Standard”, “Sum and Substance” and “Whirlwind”): irregular green blotched scattered in the yellow lamina, green bands running along the veins having an “ink-bleeding” look, malformations, different leaf thickness. Electron microscopic observations revealed the presence of virus particles ca. 560-600 nm in length, which in ISEM and PAS-ELISA tests clearly reacted with the antiserum to HVX (provided by University of Minnesota, MN, USA). Mechanical inoculations carried out using symptomatic hosta leaf sap made it possible to transmit HVX to Chenopodium murale L. (necrotic pin-point lesions) and Gomphrena globosa L. (necrotic red spots 2-3 mm in size). By applying RT-PCR with specific primers HVXCP+ 5’-ATGGCAAGTGACGCACCAACTCCACC-3’ and HVXCP- 5’- TCAACTTGAGCCTTCCGGG-3’ that amplified a fragment of 663 nt based on the coat protein gene, HVX appeared closely related to polish isolate FJ821705 (98% nucleotide identity). To prevent HVX spread it is important to minimize mechanic contact between plantlets during cultivation, and immediately remove those showing visible virus-like symptoms. Considering that two of the infected varieties tested have been imported from Holland, certified virus-free propagation material must...

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Case report · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.002
Threshold uncertainty score0.005

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0010.001

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.019
GPT teacher head0.231
Teacher spread0.212 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designCase report
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

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Citations0
Published2010
Admission routes1
Has abstractyes

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