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Record W3155376846 · doi:10.1109/jsen.2021.3072578

Miniature Fiber-Spectrophotometer for Real-Time Biomarkers Detection

2021· article· en· W3155376846 on OpenAlexafffund
Vahid Khojasteh Lazarjan, Anahita Bakhshizadeh Gashti, Mohamad Feshki, Alain Garnier, Benoit Gosselin

Bibliographic record

VenueIEEE Sensors Journal · 2021
Typearticle
Languageen
FieldMedicine
TopicCAR-T cell therapy research
Canadian institutionsUniversité Laval
FundersNatural Sciences and Engineering Research Council of CanadaCanada First Research Excellence Fund
KeywordsNotationSpectrometerAnalytical Chemistry (journal)Computer sciencePhysicsMathematicsChromatographyChemistryOptics

Abstract

fetched live from OpenAlex

This paper presents a miniature and cost-effective cell fiber-spectrophotometer based on fluorescence emission sensing for real-time detection of biomarkers. The prototype comprises a highly sensitive spectrometer embedded in an inexpensive 3D-printed housing and a custom-designed printed circuit board to transmit the data wirelessly. Results show that this portable system can identify micro-volume samples of tubulin protein, a well-known biomarker, to study different types of cancer. Additionally, our ambulatory prototype is small in size (30 mm$\times24$mm$\times43$mm), lightweight (19 g), economical, and low-power (103 mW). Fluorescence spectrophotometry measurement results obtainedin vitrofor stained VERO E6 cells using the presented prototype are reported. A set of samples with varying concentrations of Alexa Fluor 488 were also tested, and their spectral responses were measured within the range of 340–850 nm with a resolution of 15 nm. The measured limits of quantification and detection are 20 and$4~\mu \text{g}$/mL, respectively, while the measured responsivity is 85 mV/nW with a minimum detectable power of 117 fW at 519 nm. Intra- and inter-day relative standard deviations of 1.5% and 4.7%, respectively, were measured during longitudinal sensitivity experiments.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.001
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: none
Teacher disagreement score0.004
Threshold uncertainty score0.012

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0010.001
Meta-epidemiology (narrow)0.0010.001
Meta-epidemiology (broad)0.0010.001
Bibliometrics0.0010.001
Science and technology studies0.0000.000
Scholarly communication0.0010.001
Open science0.0020.001
Research integrity0.0020.001
Insufficient payload (model declined to judge)0.0040.003

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.021
GPT teacher head0.309
Teacher spread0.288 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations10
Published2021
Admission routes2
Has abstractyes

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Same venueIEEE Sensors JournalSame topicCAR-T cell therapy researchFrench-language works237,207