MétaCan
Menu
Back to cohort
Record W3156790793 · doi:10.1111/jse.12750

A comprehensive species sampling sheds light on the molecular phylogenetics of Calothecinae (Poaceae, Pooideae, Poeae): Evidence for a new subtribe and multiple genera within the <i>Chascolytrum</i> clade

2021· article· en· W3156790793 on OpenAlex

Why this work is in the frame

A frame that forgets how it found something cannot be audited. These are the routes that admitted this work.

affAt least one author lists a Canadian institution in the pinned OpenAlex snapshot.

Bibliographic record

VenueJournal of Systematics and Evolution · 2021
Typearticle
Languageen
FieldAgricultural and Biological Sciences
TopicPlant Taxonomy and Phylogenetics
Canadian institutionsCanadian Museum of Nature
Fundersnot available
KeywordsBiologyCladeIncertae sedisMolecular phylogeneticsGenusNdhFBotanyZoologyMonophylyPhylogenetics

Abstract

fetched live from OpenAlex

Abstract The circumscription of the grass subtribe Calothecinae has undergone several changes since its description. Currently, it comprises Chascolytrum and the recently described genera Laegaardia and Paramochloa . Here we evaluate the circumscription of Calothecinae and the recently proposed infrageneric classification of Chascolytrum based on a phylogeny with more comprehensive taxon and molecular marker sampling than in previous studies. We sampled all Calothecinae genera, all but one Chascolytrum species, two South American Trisetum s.l ., and representatives of the subtribes Agrostidinae, Brizinae, Echinopogoninae, Koeleriinae, Phalaridinae, and Torreyochloinae within Poaceae tribe Poeae. We performed Bayesian and Maximum Likelihood analyses of four plastid DNA regions ( atpF‐atpH , matK , rps16 intron, and trnL‐trnF ) and two nuclear ribosomal regions (ITS and ETS). Our results revealed that neither Calothecinae nor Chascolytrum is monophyletic, as currently recognized, because Trisetum brasiliense and Trisetum bulbosum are nested within Chascolytrum . We include these two Trisetum species in Calothecinae as incertae sedis . Laegaardia and Paramochloa form a clade that is sister to the Chascolytrum + Trisetum clade, and based on morphological characters, we transfer the former to the new subtribe Paramochloinae. Our Chascolytrum phylogeny is better resolved and supported than in previous studies, and based on these results, we divide Chascolytrum into nine genera, including two new ones: Boldrinia (gen. nov.), Calotheca , Chascolytrum , Erianthecium , Lombardochloa , Microbriza , Poidium , Rhombolytrum , and Rosengurttia (gen. nov.). We provide a key to Calothecinae genera, descriptions of the genera, nomenclatural information, and keys to species of each genus. In addition, six new combinations are proposed.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.671
Threshold uncertainty score0.172

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.087
GPT teacher head0.246
Teacher spread0.159 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it