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Record W3157495480 · doi:10.24908/iqurcp.8475

7.  Dkk‐1/Ror2 and Wnt5a/Ror2 Production of CDX2: Defining Intestinal Adenocarcinoma

2016· article· en· W3157495480 on OpenAlexvenueno aff
Jay Jantz

Bibliographic record

VenueInquiry Queen s Undergraduate Research Conference Proceedings · 2016
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicDigestive system and related health
Canadian institutionsnot available
Fundersnot available
KeywordsWnt signaling pathwayCDX2Cell biologyCancer researchp38 mitogen-activated protein kinasesWNT5AChemistryProto-oncogene tyrosine-protein kinase SrcSignal transductionMAPK/ERK pathwayBiologyBiochemistryTranscription factorHomeobox

Abstract

fetched live from OpenAlex

Wnt signaling regulates cell proliferation and differentiation through ahomeostasis of canonical and noncanonical pathways. Aberrant Wnt signaling induces intestinal adenocarcinoma by promoting stem cell hyperproliferation. In the intestine, Wnt5a binds to its receptor Ror2 to increase the caudal homeobox factor CDX2, a transcriptional activator of intestinal differentiation. Contradictorily, it was also shown that Ror2 alone is overexpressed in adenocarcinoma, and that Ror2 alone will mediate CDX2 increase in vitro. The purpose of this research is to determine how CDX2 is increased by Ror2 alone and Wnt5a/Ror2. Human colon adenocarcinoma cells (HT‐29, SW‐480, and RKO) were used as an in vitro epithelial model. HT‐29 cells constitutively express the signaling protein Dickkopf‐1, whereas SW‐480 and RKO do not. Wnt5a/rhDkk‐1 was used to treat Ror2 or siRor2 transfected cells primed with MAP kinase pharmacological inhibitors. The results show that CDX2 was increased after Ror2 overexpression in HT29, but not RKO/SW480 cells. Further addition of Dkk‐1 to RKO/SW480 cells resulted in CDX2 increase. Pharmacological inhibition of p38 MAPK, casein kinase 1, or Src kinase decreased CDX2 protein ~24% in Dkk‐1/Ror2 cells, while inhibition of JNK, casein kinase 1, or Src kinase in Wnt5a/Ror2 cells decreased CDX2 protein ~35%. The conclusion is that Ror2 increase in CDX2 protein is dependent on Dkk‐1 or Wnt5a. Dkk‐1/Ror2 CDX2 production is mediated by the MAP kinases p38, CK1, and Src. Wnt5a/Ror2 increases in CDX2 require JNK activation, but not p38 MAPK. Different signaling pathways, dependent on the presence of Dkk1/Wnt5a, offer an explanation for the seemingly contradictory increase in Ror2 alone seen in intestinal adenocarcinoma.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.002
metaresearch head score (Gemma)0.001
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.020
Threshold uncertainty score0.686

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0020.001
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.001
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.065
GPT teacher head0.352
Teacher spread0.287 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2016
Admission routes1
Has abstractyes

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