Phylogenetic analysis of the complete mitochondrial genome of the graphic beauty butterfly <i>Baeotus beotus</i> (Doubleday 1849) (Lepidoptera: Nymphalidae: Nymphalinae: Coeini)
Bibliographic record
Abstract
The graphic beauty butterfly Baeotus beotus (Doubleday 1849) (Nymphalidae: Coeini) is a rare fruit feeding species that inhabits humid tropical forests in Central and South America. Genome skimming by Illumina sequencing allowed assembly of a complete circular mitogenome of 15,131 bp from B. beotus consisting of 80.4% AT nucleotides, 22 tRNAs, 13 protein-coding genes, two rRNAs and a control region in the typical butterfly gene order. Baeotus beotus COX1 features an atypical CGA start codon and COX1, COX2, ND1, and ND4 exhibit incomplete stop codons completed by the addition of 3’ A residues to the mRNA. Bayesian phylogenetic reconstruction places B. beotus as sister to Cyrestis thyodamas (Cyrestini), which is consistent with previous phylogenetic hypotheses.
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How this classification was reachedexpand
Full frame machine prediction
Teacher imitationNot calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.
Distilled classifier scores by category (both heads)
| Category | Codex | Gemma |
|---|---|---|
| Metaresearch | 0.000 | 0.000 |
| Meta-epidemiology (narrow) | 0.000 | 0.000 |
| Meta-epidemiology (broad) | 0.000 | 0.000 |
| Bibliometrics | 0.001 | 0.001 |
| Science and technology studies | 0.000 | 0.000 |
| Scholarly communication | 0.000 | 0.000 |
| Open science | 0.000 | 0.000 |
| Research integrity | 0.000 | 0.000 |
| Insufficient payload (model declined to judge) | 0.001 | 0.000 |
Machine scores (provisional)
The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.
Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.
score_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from itClassification
machine, unvalidatedMachine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.
How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".