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Record W3157903503 · doi:10.1093/hmg/ddab124

Genome-wide association study of cardiac troponin I in the general population

2021· article· en· W3157903503 on OpenAlexaff
Marta R. Moksnes, Helge Røsjø, Anne Richmond, Magnus Nakrem Lyngbakken, Sarah E. Graham, Ailin Falkmo Hansen, Brooke N. Wolford, Sarah A. Gagliano Taliun, Jonathon LeFaive, Humaira Rasheed, Laurent F. Thomas, Wei Zhou, Nay Aung, Ida Surakka, Nicholas J. Douville, Archie Campbell, David J. Porteous, Steffen E. Petersen, Patricia B. Munroe, Paul Welsh, Naveed Sattar, George Davey Smith, Lars G. Fritsche, Jonas B. Nielsen, Bjørn Olav Åsvold, Kristian Hveem, Caroline Hayward, Cristen J. Willer, Ben Brumpton, Torbjørn Omland

Bibliographic record

VenueHuman Molecular Genetics · 2021
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicGenetic Associations and Epidemiology
Canadian institutionsUniversité de MontréalMontreal Heart Institute
FundersNational Human Genome Research InstituteNational Heart, Lung, and Blood InstituteFakultet for medisin og helsevitenskap, Norges Teknisk-Naturvitenskapelige UniversitetNorwegian Institute of Public HealthNational Institutes of HealthNorges ForskningsrådAcademy of Medical SciencesSt. Olavs Hospital Universitetssykehuset i TrondheimMedical Research CouncilHelse Midt-NorgeNational Institute for Health and Care ResearchNorges Teknisk-Naturvitenskapelige UniversitetStiftelsen Kristian Gerhard JebsenFaculty of Medicine and Health, University of SydneyUniversity of Michigan
KeywordsMendelian randomizationTroponin IGenome-wide association studyPopulationBiologyInternal medicineMyocardial infarctionBiomarkerBiobankCardiologyGeneticsMedicineSingle-nucleotide polymorphismGenotypeGeneEnvironmental health

Abstract

fetched live from OpenAlex

Circulating cardiac troponin proteins are associated with structural heart disease and predict incident cardiovascular disease in the general population. However, the genetic contribution to cardiac troponin I (cTnI) concentrations and its causal effect on cardiovascular phenotypes are unclear. We combine data from two large population-based studies, the Trøndelag Health Study and the Generation Scotland Scottish Family Health Study, and perform a genome-wide association study of high-sensitivity cTnI concentrations with 48 115 individuals. We further use two-sample Mendelian randomization to investigate the causal effects of circulating cTnI on acute myocardial infarction (AMI) and heart failure (HF). We identified 12 genetic loci (8 novel) associated with cTnI concentrations. Associated protein-altering variants highlighted putative functional genes: CAND2, HABP2, ANO5, APOH, FHOD3, TNFAIP2, KLKB1 and LMAN1. Phenome-wide association tests in 1688 phecodes and 83 continuous traits in UK Biobank showed associations between a genetic risk score for cTnI and cardiac arrhythmias, metabolic and anthropometric measures. Using two-sample Mendelian randomization, we confirmed the non-causal role of cTnI in AMI (5948 cases, 355 246 controls). We found indications for a causal role of cTnI in HF (47 309 cases and 930 014 controls), but this was not supported by secondary analyses using left ventricular mass as outcome (18 257 individuals). Our findings clarify the biology underlying the heritable contribution to circulating cTnI and support cTnI as a non-causal biomarker for AMI in the general population. Using genetically informed methods for causal inference helps inform the role and value of measuring cTnI in the general population.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: Observational
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.182
Threshold uncertainty score0.574

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0010.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.013
GPT teacher head0.281
Teacher spread0.268 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations20
Published2021
Admission routes1
Has abstractyes

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