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Record W3163099929 · doi:10.3390/f12050631

Short Communication: IPC Salix Cultivar Database Proof-of-Concept

2021· article· en· W3163099929 on OpenAlexaffabout
Patrick N. McGovern, Yulia A. Kuzovkina, Raju Soolanayakanahally

Bibliographic record

VenueForests · 2021
Typearticle
Languageen
FieldAgricultural and Biological Sciences
TopicBioenergy crop production and management
Canadian institutionsAgriculture and Agri-Food Canada
Fundersnot available
KeywordsWillowDatabaseComputer scienceBiologyBotany

Abstract

fetched live from OpenAlex

A variety of Salix L. (Willow) tree and shrub cultivars provide resources for significant commercial markets such as bioenergy, environmental applications, basket manufacturing, and ornamental selections. The International Poplar Commission of the Food and Agriculture Organization (IPC FAO) has maintained the Checklist for Cultivars of Salix L. (Willow) since 2015 and now lists 968 epithet records in a Microsoft Excel spreadsheet format. This Proof-of-Concept (POC) investigates using an SQL database to store existing IPC Salix cultivar information and provide users with a format to compare and submit new Salix cultivar entries. The original IPC data were divided into three separate tables: Epithet, Species, and Family. Then, the data were viewed from three different model perspectives: the original Salix IPC spreadsheet data, the Canadian (PWCC), and the Open4st database. Requirements for this process need to balance database integrity rules with the ease of adding new Salix cultivar entries. An integrated approach from all three models proposed three tables: Epithet, Family, and Pedigree. The Epithet and Family tables also included Species data with a reference to a website link for accepted species names and details. The integrated process provides a more robust method to store and report data, but would require dedicated IT personnel to implement and maintain long-term. A potential use case scenario could involve users submitting their Checklist entries to the Salix administrator for review; the entries are then entered into a test environment by IT resources for final review and promotion to a production online environment. Perhaps the most beneficial outcome of this study is the investigation of various strategies and standards for Epithet and Family recording processes, which may benefit the entire Populus and Salix communities.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.015
metaresearch head score (Gemma)0.026
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Not applicable · Consensus signal: Not applicable
GenreCandidate signal: Software · Consensus signal: none
Teacher disagreement score0.157
Threshold uncertainty score0.525

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0150.026
Meta-epidemiology (narrow)0.0010.001
Meta-epidemiology (broad)0.0010.001
Bibliometrics0.0020.001
Science and technology studies0.0010.001
Scholarly communication0.0060.007
Open science0.0050.004
Research integrity0.0020.003
Insufficient payload (model declined to judge)0.1570.078

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.034
GPT teacher head0.255
Teacher spread0.221 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designNot applicable
Domainnot available
GenreSoftware

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations2
Published2021
Admission routes2
Has abstractyes

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