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Record W3167782298 · doi:10.1139/cjps-2021-0024

Diversity and relationships of<i> Miscanthus sinensis</i> from 20 geographical distributions in China based on SSR markers

2021· article· en· W3167782298 on OpenAlexvenueno aff
Qiang Li, Wenyue Ji, Jing Zhang, Junhua Peng, Miao He

Bibliographic record

VenueCanadian Journal of Plant Science · 2021
Typearticle
Languageen
FieldAgricultural and Biological Sciences
TopicBioenergy crop production and management
Canadian institutionsnot available
Fundersnot available
KeywordsMiscanthus sinensisBiologyGenetic diversityMiscanthusUPGMAGermplasmMicrosatellitePerennial plantBotanyHerbaceous plantPopulationMolecular markerAgronomyHorticultureGenetic variationAlleleGeneticsBiotechnologyBioenergyGene

Abstract

fetched live from OpenAlex

Miscanthus is a C4 herbaceous perennial genus, and it was chosen as a bioenergy crop due to high biomass yield. Miscanthus sinensis has many phenotypes which are adapted to various environments in China. In this study, 421 accessions of M. sinensis were collected from 22 provinces, and the genetic polymorphisms amongst these germplasm collections were identified using 20 primer pairs designed against 10 each from expressed sequence tag-simple sequence repeats [EST-SSR (eSSR)] and genomic SSR (gSSR) transferable markers from barley. A total of 95 SSR polymorphic bands were detected producing a 100% polymorphic rate among these M. sinensis accessions. The gSSR markers showed a richer genetic polymorphism than eSSR markers. Based on the unweighted pair group method with arithmetic mean (UPGMA) clustering, there was a distinct sub-population separation in M. sinensis, which indicates that geographical differences and natural selection are the driving forces for genetic variation and evolution in the species. The 20 pairs of barley markers matched to 26 polymorphic bands associated with date of heading, plant height, leaf weight, stem weight, leaf/stem ratio, and total biomass yield. Eleven marker polymorphic bands were associated with the date of heading, 4 with plant height, 10 with leaf weight, 7 with stem weight, 3 with leaf/stem ratio, and 10 with biomass yield.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: Observational
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.005
Threshold uncertainty score0.011

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0020.001
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0010.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.016
GPT teacher head0.172
Teacher spread0.155 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2021
Admission routes1
Has abstractyes

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