MétaCan
Menu
Back to cohort

Hyperargininemia in an inducible arginase‐1 deficient mouse model

2013· article· en· W3168183869 on OpenAlexaff
Angie Sin, Laurel L. Ballantyne, Kamalika Mukherjee, Tim St. Amand, Crystal M. McCracken, Valeriy Levandovskiy, Andreas Schulze, Colin Funk

Bibliographic record

VenueThe FASEB Journal · 2013
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicAmino Acid Enzymes and Metabolism
Canadian institutionsHospital for Sick ChildrenQueen's University
Fundersnot available
KeywordsArginaseOrnithineKnockout mouseArginineProtein arginine methyltransferase 5EndocrinologyInternal medicineConditional gene knockoutChemistryBiologyPhenotypeBiochemistryMedicineGeneAmino acidMethyltransferase

Abstract

fetched live from OpenAlex

We generated an inducible arginase‐1 (Arg1) deficient mouse model by crossing “floxed” Arg1 mice with the Cre‐ER‐T2 model (Arg1‐Cre). These Arg1‐Cre mice die about 2 weeks after tamoxifen administration regardless of the starting age of inducing the knockout and show signs of hyperammonemia and significantly elevated arginine levels (n=4–5; four time points from 2 weeks to 14 weeks of age). Plasma creatine and creatinine levels are normal but guanidinoacetate is increased as assessed by tandem mass spectrometry. Attempts to rescue the lethality or at least to mitigate the biochemical defects caused by loss of arginase‐1 by supplementation of ornithine in the drinking water (n=5) were unsuccessful. An arginase‐1/green fluorescent protein retains full catalytic activity and is being introduced into liver hepatocytes and induced pluripotent stem cells obtained from Arg1‐Cre mice in vitro and to animals in vivo to restore normal biochemistry and to rescue the severe phenotypic consequences of deficiency of this enzyme. Arg1‐Cre mice should prove useful to explore the biochemical defects associated with arginase‐1 deficiency and to explore genetic correction strategies.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.003
Threshold uncertainty score0.010

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0010.000
Meta-epidemiology (narrow)0.0010.000
Meta-epidemiology (broad)0.0010.001
Bibliometrics0.0010.000
Science and technology studies0.0000.001
Scholarly communication0.0010.001
Open science0.0010.000
Research integrity0.0010.002
Insufficient payload (model declined to judge)0.0030.001

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.016
GPT teacher head0.243
Teacher spread0.227 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2013
Admission routes1
Has abstractyes

Explore more

Same venueThe FASEB JournalSame topicAmino Acid Enzymes and MetabolismFrench-language works237,207