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Formate metabolism is altered in riboflavin‐deficient rats

2013· article· en· W3168265857 on OpenAlexafffundabout
Luke MacMillan, Simon G. Lamarre, Estelle Andrivon, Charlotte Dickie, Margaret E. Brosnan, John T. Brosnan

Bibliographic record

VenueThe FASEB Journal · 2013
Typearticle
Languageen
FieldMedicine
TopicFolate and B Vitamins Research
Canadian institutionsUniversité de MonctonMemorial University of Newfoundland
FundersCanadian Institutes of Health Research
KeywordsRiboflavinFormateMethylenetetrahydrofolate reductaseHomocysteineCofactorMetabolismChemistryReductaseBiochemistryGlutathioneInternal medicineGlutathione reductaseEndocrinologyEnzymeBiologyMedicine

Abstract

fetched live from OpenAlex

Riboflavin can play an important role in one‐carbon metabolism, particularly as its active forms, FAD and FMN, are used as cofactors in both the production and utilization of formate. Rats were fed either a riboflavin‐replete or a riboflavin‐deficient diet for 13 days at which point blood and tissue samples were taken. Riboflavin deficiency was assessed by the Erythrocyte Glutathione Reductase activation coefficient (EGRac). Total plasma homocysteine (Hcy), hepatic S‐adenosylmethionine (SAM), and S‐adenosylhomocysteine (SAH) concentrations were analyzed by HPLC. Hepatic methylenetetrahydrofolate reductase (MTHFR) was assessed by means of enzyme activity and immunoblot. Plasma formate was analyzed by GC‐MS. EGRac confirmed riboflavin deficiency. Plasma Hcy was elevated in the deficient animals. Hepatic SAM was lower in the deficient animals; there was no difference in SAH. MTHFR was found to be markedly reduced in the deficient group; plasma formate concentration was decreased by about 20%. The increased plasma Hcy and reduced hepatic SAM indicate an impairment in re‐methylation. The decreased plasma formate levels coupled with the defective remethylation suggest that the flavin‐dependent formate production may be decreased. This will be further examined by means of isotopic experiments to measure the endogenous rates of formate production. Grant Funding Source : Canadian Institutes of Health Research & Research Development Corporation of Newfoundland and Labrador

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.004
Threshold uncertainty score0.009

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0010.001
Meta-epidemiology (broad)0.0010.000
Bibliometrics0.0020.000
Science and technology studies0.0000.001
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0010.001
Insufficient payload (model declined to judge)0.0030.001

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.028
GPT teacher head0.299
Teacher spread0.271 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2013
Admission routes3
Has abstractyes

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