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Record W3168456120 · doi:10.1093/plankt/fbab040

<i>Acartia arbruta</i> (previously <i>A. tonsa</i>) in British Columbia: a bioindicator of climate-driven ecosystem variability in the northeast Pacific Ocean

2021· article· en· W3168456120 on OpenAlexaffabout
Julian A C Smith, Moira Galbraith, Kelly Young, R. Ian Perry, Akash R. Sastri, R. John Nelson

Bibliographic record

VenueJournal of Plankton Research · 2021
Typearticle
Languageen
FieldEarth and Planetary Sciences
TopicMarine Biology and Ecology Research
Canadian institutionsUniversity of VictoriaFisheries and Oceans Canada
Fundersnot available
KeywordsAcartia tonsaAcartiaCopepodOceanographyBiologyEcologyBioindicatorPacific decadal oscillationCrustaceanGeologyPacific ocean

Abstract

fetched live from OpenAlex

Abstract Climate change is driving biogeographic shifts in marine zooplankton. In the northeast (NE) Pacific, the distribution of the estuarine copepod, Acartia tonsa ( Dana, 1849), is generally limited to California except during marine warming events where it is found as far north as British Columbia (BC). Documentation of such events relies on accurate species identification. Phylogenetic reconstruction of the genus Acartia using 768 mitochondrial cytochrome oxidase subunit I Deoxyribonucleic Acid (DNA) sequences collected worldwide demonstrates that NE Pacific A. tonsa is distinct from all conspecifics and congeners. Males of NE Pacific A. tonsa are larger with slight differences in the fifth pair of legs as compared to geographically isolated conspecifics. Accordingly, we propose NE Pacific A. tonsa be reclassified to Acartia arbruta. Analysis of mitochondrial 16S ribosomal RNA DNA sequences from 154 specimens of A. arbruta collected from California, Oregon and BC suggests that A. arbruta detected in BC is a mixture of southern populations. Southern populations are likely driven north during “warm” phases of the oceanographic processes indexed by the Pacific Decadal Oscillation, which is positively correlated with A. arbruta biomass anomalies on the continental shelf of Vancouver Island, BC. The presence of A. arbruta in BC waters is a useful bioindicator of marine warming events.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: Observational
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.099
Threshold uncertainty score0.199

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0010.002
Science and technology studies0.0010.000
Scholarly communication0.0010.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0020.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.020
GPT teacher head0.270
Teacher spread0.250 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations3
Published2021
Admission routes2
Has abstractyes

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