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Investigating the Effects of Frizzed2 Mutations on Craniofacial Skeletal Development

2021· article· en· W3170179980 on OpenAlexafffund
Shruti S. Tophkhane, Joy M. Richman

Bibliographic record

VenueThe FASEB Journal · 2021
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicWnt/β-catenin signaling in development and cancer
Canadian institutionsUniversity of British Columbia
FundersCanadian Institutes of Health Research
KeywordsBiologyWnt signaling pathwayCell biologyMorphogenesisSignal transductionGeneticsGene

Abstract

fetched live from OpenAlex

During early embryonic development cells that form different organs such as the face, limbs, heart are unspecified. Cell‐to‐cell communication using various signalling mechanisms supports development of tissues and organs. My project concentrates on understanding cell signalling pathway involving Wingless‐related proteins (WNTs) and their role in embryonic bone and cartilage development. There is a human genetic disease caused by mutations in eight WNT pathway genes called Robinow Syndrome (RS). The functional impacts of these gene mutations on skeletogenesis remain unexplored. RS patients present with facial abnormalities and short stature. The objective of my project is to investigate the functional impacts of Frizzled2 ( FZD2 ), one class of receptor that binds to WNTs, on facial skeletal development using the chicken embryo model. There are two FZD2 variants and that cause RS, one in the extracellular ligand binding domain ( FZD2 P142L ) and the other in the intracellular domain( FZD2 G434V ). We are using the chicken since early facial and limb morphogenesis is conserved with humans. Additionally, local transgenesis is possible. We hypothesize that the FZD2 P142L variant will cause abnormal ligand‐receptor binding or receptor dimerization and the FZD2 G434V variant will interfere with Dishevelled recruitment thus altering signal transduction. We used avian replication‐competent retroviruses containing human FZD2 genes or the GFP control virus. Virus was added to high density micromass cultures composed of frontonasal mass mesenchymal cells and were assessed for differentiation after 4, 6 and 8 days of culture. All cultures formed cartilage and started to mineralize as shown by Alcian blue and alkaline phosphatase staining. However, the amount of cartilage significantly decreased by 8 days for all viruses (between 35‐53%). AlkPO staining increased in the GFP cultures but was significantly decreased by all FZD2 viruses. At 4 days, the FZD2 viruses increased cartilage condensations compared to GFP. However, at 6 days all viruses were equivalent in terms of proportion of cartilage in the cultures. By 8 days the trend had reversed and the FZD2 viruses significantly decreased chondrogenesis. We conclude that the three viruses wtFZD2 and the two variants are equivalent in their effects, initially stimulating and then inhibiting chondrogenesis. This indicates that the variants are still active rather than causing a complete loss‐of‐function. It is also possible that the variants are causing a gain‐of‐function since they behave similarly to over‐expression of wtFZD2 . This project will help unravel the complex mechanisms underpinning skeletal dysplasias affecting the face and other organs such as the limbs due to the common molecular markers and transcription factors.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.002
Threshold uncertainty score0.005

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0020.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.011
GPT teacher head0.240
Teacher spread0.229 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2021
Admission routes2
Has abstractyes

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