MétaCan
Menu
← Back to cohort

HMGA2 inhibits apoptosis through interaction with ATR/CHK1 signaling complex in human cancer cells

2013· article· en· W3170627671 on OpenAlexafffund
Suchitra Natarajan, Sabine Hombach‐Klonisch, Peter Droege, Thomas Klonisch

Bibliographic record

VenueThe FASEB Journal · 2013
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicGenomics and Chromatin Dynamics
Canadian institutionsUniversity of Manitoba
FundersNatural Sciences and Engineering Research Council of Canada
KeywordsHMGA2Gene knockdownDNA damageApoptosisCancer cellCancer researchBiologyCarcinogenesisChemistryDNA repairChromatinMolecular biologyCell biologyCancerDNAGeneticsGene

Abstract

fetched live from OpenAlex

Non‐histone chromatin‐binding High Mobility Group AT‐hook protein‐2 (HMGA2) is expressed in embryonic stem cells, absent in normal adult cells but re‐expressed in cancer cells. HMGA2 enhances chemoresistance and DNA base excision repair. Cancer cell models were treated with DNA‐damaging Methyl Methane Sulfonate (MMS) and let to recover. DNA damage was confirmed by immunofluorescence for γ‐H2AX and Comet assays. Upon MMS insult and during recovery, HMGA2 clones displayed significantly less γ‐H2AX foci, shorter comet tails and increased and sustained phosphorylation of CHK1 (pCHK1 S296 ) and ATR (pATR S428 ). Sustained presence of pCHK1 S296 and pATR S428 was dependent on the presence of HMGA2. Presence of pCHK1 S296 coincided with a prolonged G2/M arrest in HMGA2 clones. CHK1 knockdown in MMS‐treated HMGA2+ cancer cells resulted in a significant increase in apoptosis that was enhanced further by knockdown of HMGA2 and HMGA2 was found to be a novel interacting partner with ATR and CHK1. In conclusion, upon DNA damage, HMGA2 (i) sustained activation of pCHK1 signaling, (ii) prolonged G2/M arrest, (iii) inhibited apoptosis and (iv) interacted with members of the ATR signaling cascade. Small inhibitors attenuating HMGA2 function may be a novel therapeutic strategy to target HMGA2+ cancers. This research was supported by NSERC and Surgery Research Fund.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.002
Threshold uncertainty score0.007

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.001
Insufficient payload (model declined to judge)0.0020.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.017
GPT teacher head0.256
Teacher spread0.239 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2013
Admission routes2
Has abstractyes

Explore more

Same venueThe FASEB Journal→Same topicGenomics and Chromatin Dynamics→French-language works237,207→