MétaCan
Menu
← Back to cohort

An In‐Vitro Model of T Cell Exit from the T Cell Zone Mediated by Sub‐Regional Co‐Existing CCL19 and CCL21 Fields in Lymph Nodes

2013· article· en· W3172280130 on OpenAlexafffund
Saravanan Nandagopal, Francis Lin

Bibliographic record

VenueThe FASEB Journal · 2013
Typearticle
Languageen
FieldImmunology and Microbiology
TopicT-cell and B-cell Immunology
Canadian institutionsUniversity of Manitoba
FundersNatural Sciences and Engineering Research Council of CanadaManitoba Health Research CouncilCummings Foundation
KeywordsCCL19C-C chemokine receptor type 7CCL21AuxeticsCell biologyT cellChemokineChemistryBiologyImmunologyChemokine receptorMaterials scienceImmune system

Abstract

fetched live from OpenAlex

Chemokines CCL19, CCL21 and their receptor CCR7 are known key mediators for T lymphocyte recruitment to lymph nodes (LNs) and navigation within LNs. The current model of T cell exit from LNs requires additional guiding signals. However, a critical mechanism is missing to facilitate T cell exit from the T cell zone (TCZ). Based on our previous experimental and modeling studies, we propose that LNs sub‐regional CCL19 and CCL21 fields mediate T cell exit from the TCZ through CCR7 signaling. In the present study, we analyzed CCL19 and CCL21 distribution profiles in different LNs sub‐regions of mouse LNs sections by immuno‐fluorescent staining and confocal microscopy, and our results conceptually support the hypothesized LNs sub‐regional CCL19 and CCL21 fields. Furthermore, we established an in‐vitro model to quantitatively examine the migration of activated human blood T cells in simulated LNs sub‐regional CCL19 and CCL21 fields followed by cell surface CCR7 expression analysis using a previously described microfluidic system. Our results suggest that CCL19 and CCL21 mediate T cells migration in LNs sub‐regions. In particular, the results suggest the sequential actions by specific co‐existing CCL19 and CCL21 fields in the TCZ periphery and in the region further beyond for mediating T cell exit from TCZ, which is correlated with altered surface CCR7 expression. This research was funded by NSERC, CFI and MHRC.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.005
Threshold uncertainty score0.010

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.001
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0010.000
Open science0.0010.000
Research integrity0.0010.001
Insufficient payload (model declined to judge)0.0010.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.019
GPT teacher head0.220
Teacher spread0.201 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2013
Admission routes2
Has abstractyes

Explore more

Same venueThe FASEB Journal→Same topicT-cell and B-cell Immunology→French-language works237,207→