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Record W3172899769 · doi:10.1111/2041-210x.13657

Replication in field ecology: Identifying challenges and proposing solutions

2021· article· en· W3172899769 on OpenAlexafffund
Alessandro Filazzola, James F. Cahill

Bibliographic record

VenueMethods in Ecology and Evolution · 2021
Typearticle
Languageen
FieldEnvironmental Science
TopicSpecies Distribution and Climate Change
Canadian institutionsThe Scarborough HospitalUniversity of TorontoUniversity of Alberta
FundersNatural Sciences and Engineering Research Council of CanadaKillam Trusts
KeywordsReplication (statistics)Field (mathematics)EcologyComputer scienceData scienceBiology

Abstract

fetched live from OpenAlex

Abstract Field ecology has been included in a ‘replication crisis’ that extends across many scientific disciplines. However, the underlying concepts of replication, reproducibility and replicability are not always clearly distinguished, and complicate the identification of best practices. Furthermore, conducting experiments under the high variability of natural field conditions reduces the capacity for replication relative to other biological disciplines working under controlled conditions. Field ecologists are therefore facing a significant challenge in assessing the replicability of their research with implications for overall confidence in study outcomes. Through a review of the literature, we discuss several related aspects of experimental design that can enhance confidence in scientific outcomes. Specifically, we describe sample replication (repeat sample), within‐study replication (repeat experiment) and between‐study replication (repeat study) and how each can be used within field ecology. Since perfect between‐study replication (i.e. direct replication) is generally not possible in field ecology, we suggest more explicit use of conceptual replication would enhance confidence in scientific outcomes. However, such changes require cultural shifts in practice among all participants in the scientific enterprise. We suggest several tangible steps could be taken to improve confidence in ecological research: (a) increase the use of within‐study replication before publication, (b) increase replicability for aspects that we can control (e.g. pre‐register experiments, open data, publish code), (c) divest from novelty as the primary criterion for publication in leading ecological journals and invest in experimental design, (d) be sceptical of contradictory findings from studies testing similar research questions and (e) create a publishing environment that encourages more conceptual replication studies. We believe adopting these practices will increase the confidence in results for field ecology. There are critical obstacles that could prevent some scientists from increasing within‐study or between‐study replication, including short‐term funding mechanisms and the prospect of fewer publications. We suggest strategies to mitigate negative impacts to researchers, such as leading journals piloting new article categories and explicit mention of experimentally linked studies. We acknowledge that adopting greater replication in field ecology will require significant changes to cultural practices, but there are clear benefits for improving our confidence in science.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.001
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: Observational
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.077
Threshold uncertainty score0.965

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0010.001
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0010.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.101
GPT teacher head0.380
Teacher spread0.279 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations102
Published2021
Admission routes2
Has abstractyes

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