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β‐arrestin‐biased ACKR3 Promotes Gαi:β‐arrestin Complex Formation

2021· article· en· W3172984583 on OpenAlexaff
Taylor Kohlmann, Claudia Lee, Sudarshan Rajagopal

Bibliographic record

VenueThe FASEB Journal · 2021
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicReceptor Mechanisms and Signaling
Canadian institutionsTrinity College
Fundersnot available
KeywordsArrestinG protein-coupled receptorReceptorInternalizationChemistryCell biologyStimulationBiologyNeuroscienceBiochemistry

Abstract

fetched live from OpenAlex

Atypical chemokine receptor 3 (ACKR3)—previously known as CXC‐chemokine receptor 7 (CXCR7)—is involved in a wide range of physiological processes including angiogenesis, neuronal development, and tumorigenesis. As a β‐arrestin biased G protein‐coupled receptor (GPCR), ACKR3 recruits β‐arrestin, but lacks G protein activity. Work from our lab has demonstrated that Gαi and β‐arrestin can form complexes together downstream of receptor stimulation, even upon activation by β‐arrestin‐biased agonists. Therefore, we hypothesized that stimulation of β‐arrestin biased receptors such as ACKR3 also promote Gαi:β‐arrestin complex formation. Our early results indicated that Gαi and β‐arrestin 2 associate at ACKR3 when treated with the synthetic agonists WW36 and WW38. Here, we expanded our panel of ligands to include proenkephalin‐derived BAM22 and endogenous chemokine CXCL11 in addition to WW36 and WW38, and we sought to characterize the canonical behavior of ACKR3 and assess its capacity to similarly promote Gαi:β‐arrestin complex formation with endogenous ligands. Using TRUPATH as well as other bioluminescence resonance energy transfer (BRET)‐based assays, we show that all ligands did not activate Gαi, while they stimulated dose‐dependent β‐arrestin 2 recruitment to ACKR3 and internalization. This aligned with the expected behavior of a β‐arrestin‐biased GPCR. Furthermore, using split‐luciferase assays, we found that a Gαi:β‐arrestin 2 complex consistently formed in a dose‐dependent manner across all four distinct ligands. Further studies will be necessary to elucidate the mechanism of formation and functional significance of this Gαi:β‐arrestin 2 complex in ACKR3 signaling.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.002
Threshold uncertainty score0.006

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.001
Insufficient payload (model declined to judge)0.0020.001

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.031
GPT teacher head0.258
Teacher spread0.228 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2021
Admission routes1
Has abstractyes

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