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Interactive Effects of Protein Deficiency and Intestinal Nematode Infection During Pregnancy on Expression of Growth Genes in Placenta of Mice

2015· article· en· W3173473113 on OpenAlexaffabout
Lisa Starr, Marilyn E. Scott, Kristine G. Koski

Bibliographic record

VenueThe FASEB Journal · 2015
Typearticle
Languageen
FieldMedicine
TopicPregnancy and preeclampsia studies
Canadian institutionsMcGill University
Fundersnot available
KeywordsBiologyPlacentaGeneFetusGene expressionPregnancyHaematopoiesisMicroarrayNematode infectionMicroarray analysis techniquesTranscriptomeReceptorEndocrinologyInternal medicineNematodeImmunologyAndrologyCell biologyGeneticsStem cellMedicine

Abstract

fetched live from OpenAlex

Background Protein deficiency (PD) and intestinal nematode infection during pregnancy impair distinct aspects of fetal growth. We used microarrays to test the hypotheses that maternal PD and nematode infection have interactive effects on placental functions related to growth and that this would be evident in altered placental gene expression Methods Placentae were obtained on day 18 of pregnancy from CD‐1 mice fed protein sufficient (24% protein) or protein deficient (6% protein) isoenergetic diets and either uninfected or infected every 5 days with Heligmosomoides bakeri beginning on day 5 of pregnancy. Pathway analysis was performed on differentially expressed genes identified by Affymetrix GeneChip 2.0 ST mouse arrays. Results In response to H. bakeri , 323 transcripts were differentially expressed, including oxidative phosphorylation, ATP binding and hemopoiesis genes. In response to PD, 272 transcripts were differentially expressed, including endopeptidase activity and hemopoiesis genes. A significant interaction was observed for 248 transcripts, including several genes with functions in fetal growth. Notably, infection prevented PD‐induced down‐regulation of IGF‐1 receptor, insulin receptor substrate and prolactin. Conclusion In addition to their independent effects, the interaction of maternal PD and intestinal nematode infection had antagonistic effects on placental genes involved in fetal growth. These results highlight the complexity of fetal growth regulation during combined malnutrition and infection. Funding Natural Science and Engineering Council of Canada

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.001
Threshold uncertainty score0.004

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0010.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.001
Insufficient payload (model declined to judge)0.0010.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.019
GPT teacher head0.267
Teacher spread0.248 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2015
Admission routes2
Has abstractyes

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