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Pre‐eclampsia and future cardiovascular disease: role of circulating micro‐RNAs

2018· article· en· W3173504647 on OpenAlexaffabout
Christian Delles, Kenny Schlosser, Natalie Dayan, Amanpreet Kaur, Duncan J. Stewart, Louise Pilote

Bibliographic record

VenueThe FASEB Journal · 2018
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicMicroRNA in disease regulation
Canadian institutionsUniversity of OttawaMcGill University Health CentreOttawa Hospital
FundersBritish Heart Foundation
KeywordsCohortKEGGMedicineDiseaseCohort studymicroRNABioinformaticsPregnancyInternal medicineBiologyGeneticsGeneTranscriptomeGene expression

Abstract

fetched live from OpenAlex

Background Women with a history of pre‐eclampsia (PE) are at increased risk of cardiovascular events later in life. The mechanisms underlying this association are incompletely understood but likely include changes in vascular function and structure. microRNAs (miRs) may play a role in vascular health and disease; therefore, we assessed profiles of circulating miRs in women who had PE, with or without subsequent cardiovascular disease. Methods We performed comprehensive profiling of circulating miRs by RNA sequencing (Qiagen, Hilden, Germany) of plasma samples from two independent cohorts: a cohort of women who presented with premature acute coronary syndrome (ACS; cohort 1: n=18 with and n=17 without history of PE) and a cohort of women without overt cardiovascular disease (cohort 2: n=20 with and n=20 without history of PE). miR profiles associated with history of PE and ACS were established based on fold change ≥ ±1.5 and P < 0.05. Targetscan 7.0 was used to predict miR targets and KEGG pathway enrichment was determined with Partek Pathway and Genomics Suite. Results Women in the two cohorts were on average 48 years of age and had prior pregnancy over 20 years before. A total of 183 and 107 miRs were found to be differentially expressed between cases and controls in cohorts 1 and 2, respectively. Five miRs (hsa‐miRs 3131, 346, 4305, 4670‐3p and 5698) were concordantly increased or decreased in both cohorts. There were 39 and 29 KEGG pathways significantly (FDR <0.05) enriched in cohorts 1 and 2, respectively, of which 23 pathways overlapped between the cohorts. Further analysis identified 13 KEGG pathways that were common between all comparisons of PE vs control in cohorts 1 and 2, and ACS vs non‐ACS across the cohorts, including cancer, Wnt signalling, TGF‐beta and focal adhesion pathways (Figure 1). Conclusions By analysing circulating miR profiles, we identified pathways that are common between women with ACS and women with history of PE. Of particular importance, pathways involved in cell growth and adhesion may provide explanations for the link between PE and future cardiovascular diseases. Support or Funding Information Funded by grants from the Canadian Vascular Network and the British Heart Foundation (Centre of Research Excellence award RE/13/5/30177) This abstract is from the Experimental Biology 2018 Meeting. There is no full text article associated with this abstract published in The FASEB Journal .

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.001
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: Observational
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.001
Threshold uncertainty score0.004

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.001
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0010.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0010.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.006
GPT teacher head0.216
Teacher spread0.210 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2018
Admission routes2
Has abstractyes

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