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Caloxin 1c2: Experimental Evidence That It Binds Plasma Membrane Calcium Pump

2008· article· en· W3173627605 on OpenAlexaffabout
Jyoti Pande, Magdalena M. Szewczyk, R. Kuner, Paromita Ghosh, Ashok K. Grover

Bibliographic record

VenueThe FASEB Journal · 2008
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicReceptor Mechanisms and Signaling
Canadian institutionsMcMaster University
Fundersnot available
KeywordsBiotinylationStreptavidinChemistryExtracellularBiotinMembraneBiochemistryBiophysicsMolecular biologyBiology

Abstract

fetched live from OpenAlex

We engineered caloxin 1c2, a novel high affinity peptide (TAWSEVLDLLRRGGGSK‐amide) inhibitor of the Plasma Membrane Ca 2+ pump (PMCA). To show that caloxin 1c2 acts by binding to the PMCA, we synthesized a photoreactive derivative 3Bpa‐caloxin 1c2 (TA(Bpa)SEVLDLLRRGGGSK‐biotin), containing the photoreactive residue Bpa (benzoylphenylalanine) and biotin. 3Bpa‐caloxin 1c2 inhibited the Ca 2+ ‐Mg 2+ ‐ATPase activity of PMCA. The human erythrocyte membranes were photolabeled with 3Bpa‐caloxin 1c2 and the proteins were detected in the Western blots using HRP‐streptavidin to identify biotin or PMCA antibodies to detect PMCA. The photolabeled erythrocyte membranes showed a 250–270 kDa doublet with HRP‐streptavidin. The degree of biotinylation of the erythrocyte membranes depended on the length of the cross‐linking time, and concentrations of 3Bpa‐caloxin 1c2 and the membrane protein. Immunoprecipitates from the photolabeled erythrocyte membranes using a PMCA antibody showed a 250–270 kDa doublet with HRP‐streptavidin. Biotinylated proteins isolated from the photolabeled erythrocyte membranes using captavidin also showed a 250–270 kDa doublet with HRP‐streptavidin and PMCA antibodies. Caloxin 1c2 had been selected for binding to the extracellular domain 1 (amino acids 115–131) of PMCA isoform 4. Caloxin 1c2 and the extracellular domain 1 peptide of PMCA 4 competed with 3Bpa‐caloxin 1c2 for photolabeling the erythrocyte membranes. Pieces of de‐endothelialized pig coronary artery cross‐linked to 3Bpa‐caloxin 1c2 and treated with Alexa‐streptavidin were examined by confocal microscopy, using the Na + ‐pump inhibitor Bodipy‐ouabain as a positive control. Both the probes bound to the cell surface. Thus, the photoreactive derivative of caloxin 1c2 binds to PMCA at the cell surface. Supported by Heart & Stroke Foundation of Ontario.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.001
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.002
Threshold uncertainty score0.007

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.001
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0010.000
Research integrity0.0010.001
Insufficient payload (model declined to judge)0.0020.001

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.064
GPT teacher head0.286
Teacher spread0.222 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2008
Admission routes2
Has abstractyes

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