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ERRα rescues histone deacetylation‐mediated down‐regulation of PGC‐1α expression in hypoxia

2011· article· en· W3173841580 on OpenAlexafffundabout
Michael P. Czubryt, Angela Ramjiawan, Rushita A. Bagchi

Bibliographic record

VenueThe FASEB Journal · 2011
Typearticle
Languageen
FieldMedicine
TopicAdipose Tissue and Metabolism
Canadian institutionsUniversity of Manitoba
FundersCanadian Institutes of Health Research
KeywordsHistoneAcetylationHistone deacetylaseHypoxia (environmental)Regulation of gene expressionGene expressionMitochondrial biogenesisCell biologyChemistryHDAC4BiologyMitochondrionBiochemistryGene

Abstract

fetched live from OpenAlex

PGC-1α plays a key role in cardiac metabolism by regulating downstream target genes involved in fatty acid oxidation and mitochondrial biogenesis. Our objective was to examine PGC-1α expression during cardiomyocyte hypoxia. Hypoxia (12h) decreased PGC-1α expression and promoter histone acetylation. Hypoxia-induced PGC-1α down-regulation was attenuated by a histone deacetylase inhibitor, and was accelerated by an ERRα inverse agonist. We found that ERRα regulates PGC-1α gene expression via a conserved binding site in the PGC-1α promoter. Over-expression of ERRα in isolated cardiomyocytes was sufficient to induce PGC-1α expression and rescued the loss of PGC-1α expression during hypoxia. Extending hypoxia to 24h resulted in recovery of PGC-1α expression, an effect attenuated by an AMP kinase inhibitor or exaggerated by removal of glucose. Hypoxia thus exerts a biphasic effect on PGC-1α expression: initial down-regulation due to histone deacetylation, followed by restoration via activation of AMP kinase. While ERRα was not involved in hypoxia-mediated PGC-1α down-regulation, ERRα over-expression rescued this loss, and ERRα expression was required for basal PGC-1α expression. Our results describe a novel regulatory mechanism for PGC-1α expression which may contribute to metabolic derangement during ischemia and heart failure. Supported by the Canadian Institutes of Health Research.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.002
Threshold uncertainty score0.006

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0010.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.001
Insufficient payload (model declined to judge)0.0020.001

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.036
GPT teacher head0.280
Teacher spread0.244 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2011
Admission routes3
Has abstractyes

Explore more

Same venueThe FASEB Journal→Same topicAdipose Tissue and Metabolism→French-language works237,207→