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Vitamin D Receptor Deletion Leads to an Asthma Phenotype

2011· article· en· W3174323632 on OpenAlexaff
Virender K. Rehan, Yishi Li, Christopher S. Kovács, John S. Torday

Bibliographic record

VenueThe FASEB Journal · 2011
Typearticle
Languageen
FieldMedicine
TopicNeonatal Respiratory Health Research
Canadian institutionsNewfoundland and Labrador Centre for Applied Health ResearchMemorial University of Newfoundland
Fundersnot available
KeywordsWnt signaling pathwaySignal transductionBiologyPhenotypeReceptorEndocrinologyInternal medicinePathogenesisBlotCell biologyImmunologyMedicineGeneticsGene

Abstract

fetched live from OpenAlex

Background Despite strong epidemiological association between the perinatal vitamin D (VD) deficiency and childhood asthma, the mechanistic link between the two is not established. We aimed to determine the effect of VD receptor deletion on the key markers of lung maturation. Methods The lungs of wild type and VD receptor null mutant mice (C57BL6) were examined at 2 and 7 weeks postnatally for morphometry and markers of lung maturation by RT-PCR, Western blotting, and immunohistochemistry (IHC). Using the Affymetrix Mouse Genome 430 2.0 array, the transcriptional profile of the lungs from the two groups at 7 weeks of age was also examined. Results Both by Western analysis and IHC, there was down-regulation of the intermediates for PTHrP/PPARγ signaling, a key signaling pathway for lung maturation. In contrast, there was up-regulation of Wnt signaling, a key pathway in the pathogenesis of asthma. Self-Organizing Map cluster analysis corroborated these data by showing up-regulation of the Wnt signaling pathway, and down-regulation of the PTHrP/PPARγ signaling pathway in VD receptor null mice compared to WT mice. Conclusions Altered VD signaling leads to down-regulation of homeostatic PTHrP/PPARγ signaling, and up-regulation of Wnt signaling, predisposing to a myogenic pulmonary phenotype that is consistent with the propensity to asthma in VD deficiency (Grants: HL75405, HD51857, HD58948).

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.004
Threshold uncertainty score0.012

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0010.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0010.001
Insufficient payload (model declined to judge)0.0040.001

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.078
GPT teacher head0.354
Teacher spread0.276 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2011
Admission routes1
Has abstractyes

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