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TDAG51 overexpression mediates proximal tubule epithelial cell apoptosis through its accumulation in the nucleus

2012· article· en· W3174338155 on OpenAlexafffund
Alana Heffernan, Zahraa Mohammed‐Ali, Celeste A. Collins, Jeffrey G. Dickhout, Richard C. Austin

Bibliographic record

VenueThe FASEB Journal · 2012
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicNF-κB Signaling Pathways
Canadian institutionsSt. Joseph’s Healthcare HamiltonMcMaster University
FundersCanadian Institutes of Health Research
KeywordsApoptosisNuclear localization sequenceProgrammed cell deathNuclear export signalStaurosporineCell biologyMolecular biologyCytoplasmCell nucleusNuclear transportTransfectionBiologyTUNEL assayChemistryCell cultureKinaseProtein kinase ABiochemistryGenetics

Abstract

fetched live from OpenAlex

T‐cell death associated gene 51 (TDAG51) overexpression induces apoptosis in many cell types. Sequence analysis revealed that TDAG51 contains a putative nuclear export signal (NES), 78 VASLEPPVKL 87 . We hypothesize that TDAG51‐induced apoptosis is mediated through its nuclear accumulation. Leptomycin B (LMB) was employed to inhibit the nuclear export of TDAG51 in HK2 cells, a proximal tubule cell line. An EC50 of 0.8 ng/mL for LMB was calculated using the known NES of Protein Kinase A Inhibitior (PKI). Doses of 0, 1 and 5 ng/mL LMB were applied to determine any increase in TDAG51 nuclear localization. Apoptotic cell death was evaluated with TUNEL assays and nuclear to cytoplasmic ratios of TDAG51 expression were measured confocally. Both 1 and 5 ng/mL LMB induced nuclear localization of TDAG51 endogenously or ectopically expressed. The 1 ng/mL dose of LMB resulted in significantly greater apoptotic cell death in TDAG51‐transfected HK2 cells than in GFP controls. However, the 5 ng/ml dose of LMB caused an increase in apoptosis independent of TDAG51 overexpression. We assessed nuclear localization of TDAG51 under Staurosporine (STS) stimuli. Treatment with 2 μM STS showed a significant increase in apoptosis and nuclear to cytoplasmic ratios compared to vehicle‐treated controls. Our results demonstrate an increase in the nuclear accumulation of TDAG51 under apoptotic conditions. Supported by the CIHR, MOP‐67116 .

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.002
Threshold uncertainty score0.005

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.001
Insufficient payload (model declined to judge)0.0020.001

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.035
GPT teacher head0.283
Teacher spread0.248 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2012
Admission routes2
Has abstractyes

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