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Record W3174368456 · doi:10.7554/elife.64719

A community-led initiative for training in reproducible research

2021· article· en· W3174368456 on OpenAlexaff
Susann Auer, Nele A Haelterman, Tracey L. Weissgerber, Jeffrey C. Erlich, Damar Susilaradeya, Magdalena Julkowska, Małgorzata Anna Gazda, Benjamin Schwessinger, Nafisa M. Jadavji, Angela Abitua, Anzela Niraulu, Aparna Shah, April Clyburne-Sherinb, Benoit Guiquel, Bradly Alicea, Caroline M. LaManna, Diep R Ganguly, Eric Perkins, Helena Jambor, Ian Man Ho Li, Jennifer Tsang, Joanne Kamens, Lenny Teytelman, Mariella Paul, Michelle Cronin, Nicolas Schmelling, Peter A. Crisp, Rintu Kutum, Santosh Phuyal, Sarvenaz Sarabipour, Sonali Roy, Susanna M. Bächle, Tuan Tran, Tyler Ford, Vicky Steeves, Vinodh Ilangovan, Ana A. Baburamani, Susanna Bachle

Bibliographic record

VenueeLife · 2021
Typearticle
Languageen
FieldDecision Sciences
TopicScientific Computing and Data Management
Canadian institutionsCarleton University
FundersMozilla FoundationChan Zuckerberg Initiative
KeywordsLicenseBest practiceMedical educationTraining (meteorology)Engineering ethicsComputer scienceEngineering managementData sciencePolitical scienceMedicineEngineering

Abstract

fetched live from OpenAlex

Open and reproducible research practices increase the reusability and impact of scientific research. The reproducibility of research results is influenced by many factors, most of which can be addressed by improved education and training. Here we describe how workshops developed by the Reproducibility for Everyone (R4E) initiative can be customized to provide researchers at all career stages and across most disciplines with education and training in reproducible research practices. The R4E initiative, which is led by volunteers, has reached more than 3000 researchers worldwide to date, and all workshop materials, including accompanying resources, are available under a CC-BY 4.0 license at https://www.repro4everyone.org/.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.172
metaresearch head score (Gemma)0.150
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesMetaresearch
Consensus categoriesnone
DomainCandidate signal: Reproducibility · Consensus signal: none
Study designCandidate signal: Not applicable · Consensus signal: Not applicable
GenreCandidate signal: Empirical · Consensus signal: none
Teacher disagreement score0.828
Threshold uncertainty score0.910

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.1720.150
Meta-epidemiology (narrow)0.0020.002
Meta-epidemiology (broad)0.0010.002
Bibliometrics0.0040.003
Science and technology studies0.0060.005
Scholarly communication0.0090.006
Open science0.0090.039
Research integrity0.0060.014
Insufficient payload (model declined to judge)0.0410.028

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.832
GPT teacher head0.590
Teacher spread0.243 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

Study designNot applicable
DomainReproducibility
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations25
Published2021
Admission routes1
Has abstractyes

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