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Intestinal tight junction <i>CLDN2</i> gene is a direct target of the vitamin D receptor

2015· article· en· W3174459462 on OpenAlexaff
Yongguo Zhang, Shaoping Wu, Rong Lü, David Zhou, Jingsong Zhou, Elaine O. Petrof, Erika C. Claud, Jun Sun

Bibliographic record

VenueThe FASEB Journal · 2015
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicGut microbiota and health
Canadian institutionsQueen's University
Fundersnot available
KeywordsCalcitriol receptorClaudinTight junctionCell biologyIntestinal mucosaBiologyTranscription factorReceptorChemistryMolecular biologyGeneInternal medicineBiochemistryMedicine

Abstract

fetched live from OpenAlex

The breakdown of intestinal barrier is a common manifestation of GI disorders. Claudin‐2 is a tight junction protein that mediates paracellular water transport in leaky epithelium. Recent evidence suggests that vitamin D and vitamin D receptor (VDR) may regulate functions of tight junction proteins. However, it is unknown how Claudin‐2 is regulated by VDR signaling in normal and inflamed intestine. Using whole body VDR ‐/‐ mice, intestinal epithelial VDR conditional knockout (VDR ΔIEC ) mice, human samples, and cultured human intestinal epithelial cells (IEC), we performed a series of molecular and biochemical experiments in vivo and in vitro . We provide evidence that the CLDN2 gene is a direct target of the transcription factor VDR. VDR‐inducing Claudin‐2 promoter activity required the Cdx binding site on the promoter of the CLDN2 gene. We further identify a functional vitamin D response element in the Claudin‐2 promoter. In vivo , VDR deletion in intestinal epithelial cells (IEC) led to decreased Claudin‐2 at both mRNA and protein levels. Functionally, we found a robust increase of Claudin‐2 in inflammatory IECs which lacked VDR regulation and allowed the inflammatory cytokines to take over. Furthermore, in inflamed intestine of ulcerative colitis patients, VDR expression is low and Claudin‐2 is enhanced. A lack of intestinal VDR regulation leads to dysfunction of Claudin‐2 in inflammatory responses. This study reveals a complex role and novel mechanism for intestinal VDR by regulation of epithelial barriers and inflammation.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.003
Threshold uncertainty score0.009

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.001
Insufficient payload (model declined to judge)0.0030.001

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.015
GPT teacher head0.238
Teacher spread0.223 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2015
Admission routes1
Has abstractyes

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