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Distinct roles of two lipid kinases in lysosomal transport of the Gaucher disease enzyme glucocerebrosidase

2011· article· en· W3174629684 on OpenAlexaff
Marko Jović, Zsófia Szentpétery, Michelle J. Kean, Anne‐Claude Gingras, Julie A. Brill, Tamás Balla

Bibliographic record

VenueThe FASEB Journal · 2011
Typearticle
Languageen
FieldMedicine
TopicLysosomal Storage Disorders Research
Canadian institutionsHospital for Sick ChildrenLunenfeld-Tanenbaum Research Institute
Fundersnot available
KeywordsGolgi apparatusEndosomeCell biologyGlucocerebrosidaseCompartment (ship)KinaseLysosomeBiologyTransport proteinBiochemistryEnzymeEndoplasmic reticulumIntracellular

Abstract

fetched live from OpenAlex

Lysosomal function in lipid metabolism relies on the efficient trafficking of glucocerebrosidase (GBA), a key enzyme in the breakdown of lysosomal glucosylceramide, through binding to its receptor LIMP2. Mutations in GBA result in mislocalization and onset of Gaucher disease. Surprisingly, the mechanism regulating GBA/LIMP2 transport to lysosomes remains elusive. In this study we have assessed the role of phosphatidylinositol 4‐phosphate (PtdIns4 P ), a key regulator of the Golgi sorting machinery, in LIMP2 transport. Compartment‐specific depletion of PtdIns4 P results in Golgi accumulation of LIMP2. However, PtdIns4 P synthesis at the Golgi has been attributed to more then one PtdIns4 P kinase, including PI4KIIIβ and PI4KIIα. Inhibition of the PI4KIIIβ kinase activity resulted in the decreased lysosomal delivery of LIMP2. Depletion of PI4KIIα, however, affected trafficking at a post‐Golgi compartment, resulting in LIMP2 accumulation on enlarged endosomal compartments. This effect was decreased following the PI4KIIIβ inhibition, as LIMP2 exit out of Golgi towards lysosomes became impaired. Collectively, LIMP2 exit was found to depend on the PI4KIIIβ activity at the Golgi, while transport at the late endosomal compartment requires PI4KIIα, demonstrating sequential roles of two kinases in lysosomal transport.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.001
Threshold uncertainty score0.004

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0010.001
Open science0.0000.001
Research integrity0.0010.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.033
GPT teacher head0.279
Teacher spread0.246 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

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Citations0
Published2011
Admission routes1
Has abstractyes

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