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Glycogenin protein level in muscle fiber types of stimulated rodent hind limb following changes in glycogen content

2009· article· en· W3175357051 on OpenAlexafffundabout
Rhonda J. Wilson, Zongfei Yuan, Terry E. Graham

Bibliographic record

VenueThe FASEB Journal · 2009
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicMuscle Physiology and Disorders
Canadian institutionsUniversity of Guelph
FundersNatural Sciences and Engineering Research Council of Canada
KeywordsGlycogenInternal medicineGlycolysisEndocrinologyStimulationMyofibrilGlycogen synthaseChemistryHindlimbBiologyMetabolismMedicine

Abstract

fetched live from OpenAlex

Glycogenin (GN) may be degraded, may stay bound to partly‐catabolized glycogen or may form unglycosylated GN when glycogen content decreases. Oxidative and glycolytic muscle fibers may respond differently. One hind limb (40 Female Sprague Dawley rats) was stimulated to contract for 40 min to lower glycogen content. The soleus (SOL), red (RG) and white (WG) gastrocnemius muscles from unstimulated and stimulated limbs were examined for total and unglycosylated GN protein levels. Muscle tissue (corresponding unstimulated and stimulated) was grouped (n=6) by post‐stimulation glycogen content (WGI <40; WGII <100; RGI <100, RGII >100; SOL >100 μmol▸g dry wt. −1 ). GN increased (P≤0.05) in WGI (66%), RGI (33%), and RGII (100%), but was unchanged in WGII and SOL. In WGII, GN decreased in a low‐spin myofibrillar pellet fraction and increased in the soluble fraction (no net change). Unglycosylated GN was detected in stimulated W and RG muscles (up to 25% of total GN) and was most abundant in WGI (lowest glycogen content). In summary, no correlation existed between GN level and glycogen content post‐stimulation either across fiber types or within a fiber type. No net degradation of GN occurred in either W or RG muscles in response to significant reduction in glycogen content; new GN was always synthesized. Pre‐existing GN is likely retained in smaller granules or as unglycosylated protein. Funded by NSERC of Canada.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.002
Threshold uncertainty score0.007

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0020.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.033
GPT teacher head0.259
Teacher spread0.226 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2009
Admission routes3
Has abstractyes

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