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A Dynamic Spatio‐Temporal Expression Pattern of FGFR Isoforms During Scleral Ossicle Development

2018· article· en· W3175531250 on OpenAlexafffundabout
Shruti Kumar, Tamara A. Franz‐Odendaal

Bibliographic record

VenueThe FASEB Journal · 2018
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicFibroblast Growth Factor Research
Canadian institutionsMount Saint Vincent UniversitySaint Mary's University
FundersNatural Sciences and Engineering Research Council of Canada
KeywordsIntramembranous ossificationFibroblast growth factorNeural crestBiologyCell biologyGene isoformDownregulation and upregulationFibroblast growth factor receptorCranial neural crestIn situ hybridizationAnatomyReceptorGene expressionGeneEmbryoGenetics

Abstract

fetched live from OpenAlex

Fibroblast growth factors (FGFs) are an important family of proteins that play several roles during early vertebrate development. The FGF ligands bind to their membrane bound receptors (FGFRs) and activate downstream signalling pathways. Although the role of FGFRs has been widely studied in the development of endochondral bones, little is known about their role in the development of neural crest derived intramembranous bones. Scleral ossicles are a ring of 13–15 neural crest derived intramembranous bones in the eye of the chicken ( Gallus gallus ) and have been identified as a model for intramembranous bone formation. These bones are induced by a corresponding ring of epithelial thickenings, the conjunctival papillae. Using whole mount in situ hybridization, the spatio‐temporal expression patterns of ‘b’ and ‘c’ isoforms of FGFR s1–3 were determined during the stages of conjunctival papillae (HH30–33) as well as scleral ossicle development (HH34–37). The expression of both ‘b’ and ‘c’ isoforms of FGFR s1–3 were observed during conjunctival papillae development and their downregulation was observed during the stages of scleral ossicle induction. ImageJ was further used to study changes in the intensity of expression and to give a more precise indication of the stages of downregulation for each gene. Additionally, although all FGFRs were expressed in the epithelium, only FGFR s 1c, 2c, 3b and 3c were observed in the mesenchyme. The dynamic spatio‐temporal expression pattern of the FGFR isoforms during conjunctival papillae development implicates several FGF ligands in conjunctival papillae induction. This research will further our understanding of the signalling pathways potentially involved in the scleral ossicle system. FGF signaling is likely to interact with the Bone Morphogenetic Protein and Hedgehog pathways, already identified to play a role in the scleral ossicle system. Support or Funding Information This research was funded by the Natural Sciences and Engineering Research Council of Canada This abstract is from the Experimental Biology 2018 Meeting. There is no full text article associated with this abstract published in The FASEB Journal .

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.044
Threshold uncertainty score0.289

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.012
GPT teacher head0.261
Teacher spread0.249 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2018
Admission routes3
Has abstractyes

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