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Skeletal muscle PI3K/Akt signaling and ubiquitin‐related enzyme mRNA expression in lung cancer cachexia

2011· article· en· W3176140957 on OpenAlexafffund
Stéphanie Chevalier, Sergio A. Burgos, Parisa Mehrfar, Nathalie Bédard, Gabriel Altit, Errol B. Marliss, Simon S. Wing

Bibliographic record

VenueThe FASEB Journal · 2011
Typearticle
Languageen
FieldMedicine
TopicNutrition and Health in Aging
Canadian institutionsMcGill University
FundersCanadian Institutes of Health Research
KeywordsProtein kinase BCachexiaPI3K/AKT/mTOR pathwayLung cancerSkeletal muscleEndocrinologyInternal medicineCancer researchSignal transductionBiologyCancerMedicineCell biology

Abstract

fetched live from OpenAlex

The progressive loss of muscle mass is common in lung cancer. Objective to assess possible changes in signal transduction events that regulate protein synthesis and degradation in skeletal muscle of patients with early lung cancer. Muscle biopsies and blood samples were collected from non-small cell lung cancer (NSCLC) subjects, 8 with and 8 without cachexia, and 8 non-cancer controls undergoing thoracic surgery. The abundance and phosphorylation of proteins of the PI3K/Akt signaling pathway were measured by immunoblotting and expression of ubiquitin ligases and deubiquitinating enzyme USP19 mRNA, by RT-qPCR. Cachectic patients had lost 11.5 ± 1.9% body weight, had lower lean and fat mass and higher serum C-reactive protein, IL-6 and IL-8. Phospho-PRAS40Thr246 and p-FoxO1/3aThr24/32 were higher in cachectic than in other groups, despite similar p-AktSer473, but Akt, PRAS40 and FoxO3a abundance was lower. The abundance of the translational inhibitor eukaryotic initiation factor (eIF) 4E binding protein (4E-BP1) was 65% higher than in controls (P =0.009); eIF4E abundance did not differ. MuRF-1, MAFbx and USP19 mRNA expression was not different among groups. Data show lower expression of components of the PI3K/Akt signaling pathway and greater abundance of 4E-BP1 in early NSCLC cachexia that may indicate decreased mRNA translation in skeletal muscle, which in turn, could lead to muscle loss. (Funded by CIHR)

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.001
Threshold uncertainty score0.005

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0010.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.043
GPT teacher head0.317
Teacher spread0.274 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2011
Admission routes2
Has abstractyes

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