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TIMP‐1 protein but not secretion is increased by shear stress in the skeletal muscle microvasculature

2009· article· en· W3176317293 on OpenAlexaffabout
Cassandra Uchida, Małgorzata Milkiewicz, Tomasz Fudalewski, Eric Gee, Tara L. Haas

Bibliographic record

VenueThe FASEB Journal · 2009
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicProtease and Inhibitor Mechanisms
Canadian institutionsYork University
Fundersnot available
KeywordsExtracellular matrixZymographyEndocrinologyMatrix metalloproteinaseIntracellularExtracellularSecretionInternal medicineChemistryDownregulation and upregulationBiologyMedicineBiochemistry

Abstract

fetched live from OpenAlex

Luminal splitting is a form of angiogenesis caused by increased shear stress. A feature of luminal splitting is a lack of extracellular matrix proteolysis correlated with decreased production of matrix metalloproteinase (MMP)‐2. We hypothesized that an MMP inhibitor, tissue inhibitor of matrix metalloproteinase (TIMP)‐1, is upregulated by shear stress. TIMP‐1 mRNA increased in the EDL of prasozin‐treated rats (p<0.05, n=4) as measured by RT‐PCR. Rat skeletal muscle microvascular endothelial cells were exposed to shear stress (12 dyne/cm 2 ). TIMP‐1 mRNA increased in cells after 2 and 24 hours of shear (p<0.05, n=3), and TIMP‐1 protein increased at 2 and 24 but not 4 hours (p<0.05, n=3) as assessed by Western. TIMP‐1 secretion decreased at 2 hours of shear and returned to control levels at 24 hours (p<0.01, n=3) as measured by reverse zymography of concentrated media. Similarly, MMP‐2 activity increased in media at 2 but not 24 hours of shear (p<0.05, n=7) as assessed by an in vitro MMP‐2 activity assay (Anaspec). 2 hours of shear caused no change in TIMP‐1 surface staining (ns, n=3) as assessed by confocal microscopy, but did cause an increase in intracellular TIMP‐1 staining (p<0.05, n=3). Our results show that intracellular TIMP‐1 protein is increased by shear stress, due to increased production and decreased secretion. The function of intracellular TIMP‐1 is unknown. Funded by the Heart and Stroke Foundation of Canada. Grant Funding Source Heart and Stroke Foundation of Canada

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.002
Threshold uncertainty score0.008

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.001
Insufficient payload (model declined to judge)0.0020.001

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.006
GPT teacher head0.213
Teacher spread0.208 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2009
Admission routes2
Has abstractyes

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