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Identification of structural and functional determinants of Ca <sup>2+</sup> ‐dependent kinetics of voltage‐gated calcium channel regulation by CaM

2009· article· en· W3176437953 on OpenAlexafffund
Valentina Taiakina, David Spafford, J. Guy Guillemette

Bibliographic record

VenueThe FASEB Journal · 2009
Typearticle
Languageen
FieldNeuroscience
TopicNeurobiology and Insect Physiology Research
Canadian institutionsUniversity of Waterloo
FundersNatural Sciences and Engineering Research Council of Canada
KeywordsCalmodulinRegulatorCalcium channelKineticsChannel (broadcasting)BiophysicsChemistryVoltage-dependent calcium channelElectrophysiologyBiologyCalciumBiochemistryNeurosciencePhysicsComputer scienceGeneTelecommunications

Abstract

fetched live from OpenAlex

Calmodulin (CaM), a widely expressed and highly conserved Ca 2+ ‐sensing regulatory protein with at least 300 known targets, has been recently implicated in the Ca 2+ ‐dependent inactivation and facilitation of voltage‐gated calcium channels. Due to its bi‐lobed structure, CaM is able to serve as a bi‐functional sensor and regulator of channel activity. The particular contribution of each of the two lobes and the associated forms of regulation are not universally understood or generalized for each channel type, and even less so are the particular channel regions responsible for the association and regulation by CaM. In this study we examined unique regions outside the canonical channel CaM‐binding domains for their ability to dictate the electrophysiological profile of any channel type. Channel chimaeras were constructed and patch‐clamp recordings were performed to determine the Ca 2+ ‐dependent kinetics profiles. Furthermore, the peptides corresponding to putative CaM‐binding regions of the channel were synthesized and the binding properties were analyzed. The implications for the channel regulatory model and some unifying principles are discussed. This work received NSERC funding.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.001
Threshold uncertainty score0.002

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0010.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.032
GPT teacher head0.289
Teacher spread0.257 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2009
Admission routes2
Has abstractyes

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