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Integration and the genetics of variation in facial shape

2019· article· en· W3176482524 on OpenAlexafffund
Benedikt Hallgrímsson, J. David Aponte, David C. Katz, Jordan J. Bannister, Rebecca M. Green, Nathan M. Young, James M. Cheverud, Nils D. Forkert, Ralph Marcucio

Bibliographic record

VenueThe FASEB Journal · 2019
Typearticle
Languageen
FieldMathematics
TopicMorphological variations and asymmetry
Canadian institutionsAlberta Children's HospitalUniversity of Calgary
FundersNatural Sciences and Engineering Research Council of CanadaCanadian Institutes of Health ResearchNational Institutes of Health
KeywordsVariation (astronomy)BiologyHeritabilityEvolutionary biologyGenetic variationGeneticsGenetic architectureCraniofacialQuantitative geneticsPopulationQuantitative trait locusGeneDemography

Abstract

fetched live from OpenAlex

Human facial form is both highly variable and heritable. Despite considerable effort, however, the genetic basis for the strong and often very particular patterns of resemblance among relatives are largely unknown. The apparently highly polygenic basis for facial shape variation appears to be at odds with the strong and often highly specific patterns of heritability for facial features. Facial shape variation tends to be structured around developmentally determined patterns of correlated variation. This tendency for covariation or integration results in morphological variation that occupies only a fraction of it possible dimensions. Synthesizing results from experimental and quantitative genetics of the face and applying multivariate genotype‐phenotype mapping, we argue that the integrated nature of variation in facial form can simplify qualitative explanations of the genetics of face but greatly complicate the ability to quantitatively relate genetic to phenotypic variation. Acting on variation in development, many genetic variants push or pull variation along the same limited number of dimensions that correspond to patterns of covariation among aspects of craniofacial variation, producing complex and overlapping patterns of pleiotropic effects. Developmental nonlinearities and interactions among processes at multiple levels result in gene interaction effects that can result in specific genetic variants having genetic background specific effects whilst having small and difficult to detect effects on variation at the population level. These findings have important general implications for the genetics of complex traits. Support or Funding Information CIHR Foundation Grant, NSERC #238992‐17, NIH R01DE019638; U01DE024440 This abstract is from the Experimental Biology 2019 Meeting. There is no full text article associated with this abstract published in The FASEB Journal .

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Theoretical or conceptual · Consensus signal: Theoretical or conceptual
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.198
Threshold uncertainty score0.246

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0010.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.032
GPT teacher head0.272
Teacher spread0.240 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designTheoretical or conceptual
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations1
Published2019
Admission routes2
Has abstractyes

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