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Subcellular location and colocalization of lipid droplet proteins, ADRP and OXPAT, in resting and stimulated rat soleus

2011· article· en· W3176821049 on OpenAlexaffabout
Rebecca E. K. MacPherson, Eric A.F. Herbst, Erica J. Reynolds, Rene Vandenboom, Brian D. Roy, Sandra J. Peters

Bibliographic record

VenueThe FASEB Journal · 2011
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicLipid metabolism and biosynthesis
Canadian institutionsBrock University
Fundersnot available
KeywordsColocalizationLipid dropletLipolysisSarcolemmaStimulationPerilipinChemistryLipid metabolismContraction (grammar)Skeletal muscleBiologyBiophysicsCell biologyBiochemistryAnatomyEndocrinologyAdipose tissue

Abstract

fetched live from OpenAlex

Skeletal muscle lipid droplet proteins are thought to regulate lipolysis through protein-protein interactions on the lipid droplet surface. In cultured cells ADRP is found only on lipid droplets, while OXPAT (expressed only in oxidative tissues) is found both on and off the lipid droplet, and may be recruited when needed. Our purpose was to determine if OXPAT is recruited to ADRP-coated lipid droplets with contraction, and to investigate the myocellular location and colocalization of OXPAT and ADRP. Rat solei were isolated and assigned one of two groups: 1) a 30 min resting incubation; 2) a 30 min stimulation; 150 ms trains of 0.1ms impulses (60 Hz) at 20 tetani/min for maximal lipid utilization (n=5 each, 25°C). Immunofluorescence microscopy was used to determine subcellular distribution and colocalization. ADRP and OXPAT distribution showed an exponentially higher content from the sarcolemma toward the central region (p<0.001), with no effect of contraction (p=.99). ADRP-OXPAT colocalized at rest and there was no significant difference post stimulation (p=0.11; rest r2=0.64±0.03, stimulated r2=0.71±0.01). There was no difference in either ADRP (p=0.58) or OXPAT (p=0.75) content post stimulation. Contrary to our hypothesis these results show that OXPAT is not recruited to the lipid droplet during contraction and is highly colocalized with ADRP at all times. Supported by NSERC, Canada.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.002
Threshold uncertainty score0.004

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0010.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.015
GPT teacher head0.210
Teacher spread0.195 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2011
Admission routes2
Has abstractyes

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