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miR‐1 and miR‐301a Overexpression Impairs Collagen Gel Contraction in Human Mesenchymal Stem Cells

2012· article· en· W3177090500 on OpenAlexaff
Jessica Klassen, Shannon Neumann, Mina Guirgis, Yun Li, Ian Dixon, Darren H. Freed

Bibliographic record

VenueThe FASEB Journal · 2012
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicMicroRNA in disease regulation
Canadian institutionsUniversité de Saint-BonifaceSt. Boniface Hospital
Fundersnot available
KeywordsMesenchymal stem cellMyofibroblastTransfectionCell biologymicroRNAMyosinContractilityDownregulation and upregulationChemistryType I collagenMolecular biologyBiologyCell cultureFibrosisPathologyBiochemistryEndocrinologyMedicineGeneGenetics

Abstract

fetched live from OpenAlex

Previous data in our lab suggests that human mesenchymal stem cells (MSCs) display a myofibroblast phenotype in vitro, coincident with a reduction in miR‐301a expression. We hypothesize that miR‐301a and miR‐1 signalling plays a role in modulating the MSC‐myofibroblast phenotype. The protocol received IRB approval. Human bone marrow derived MSCs were plated on collagen gel substrates and transfected with pre‐miR‐1 and pre‐miR‐301a. The reduction in collagen gel area was analyzed 48 hours post transfection and qRT‐PCR was used to analyze RNA profile and expression of myosin isoforms. MSCs were found to express both non‐muscle myosin (NMM) IIA and IIB, and readily contracted collagen gels in the basal state, which was increased with TGF‐β1. While overexpression of miR‐301a or miR‐1 both resulted in reduced collagen gel contraction, miR‐1 had a greater effect attenuating contractility. Overexpression with both miR‐1 and miR‐301a decreased NMMIIA expression, while no change was observed with NMMIIB expression. Overexpression of miR‐301a and miR‐1 reduced MSC contractility through reduced myosin expression. It is likely that miR‐1 and miR‐301a target additional proteins in these cells.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.002
Threshold uncertainty score0.006

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.001
Insufficient payload (model declined to judge)0.0020.001

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.012
GPT teacher head0.254
Teacher spread0.242 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2012
Admission routes1
Has abstractyes

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