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Peroxynitrite‐induced changes in 72kDa matrix metalloproteinase‐2 activity are further regulated by its phosphorylation status

2011· article· en· W3177099450 on OpenAlexafffund
Anna Laura Bechara Jacob Ferreira, Richard Schulz

Bibliographic record

VenueThe FASEB Journal · 2011
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicProtease and Inhibitor Mechanisms
Canadian institutionsUniversity of Alberta
FundersCanadian Institutes of Health Research
KeywordsPeroxynitriteMatrix metalloproteinasePhosphorylationChemistryCell biologyMatrix metalloproteinase 9Matrix (chemical analysis)BiochemistryBiologyEnzyme

Abstract

fetched live from OpenAlex

Matrix metalloproteinase-2 (MMP-2) is a key protease in several oxidative stress related pathologies. 72kDa MMP-2 activity is modulated by peroxynitrite (ONOO−), or phosphorylation, however, the effect of these together has not been tested. The activity of human recombinant 72kDa MMP-2 following various in vitro treatments was measured by gelatin zymography. ONOO− treatment (15min, 37°C) resulted in concentration-dependent changes in MMP-2 activity, with 0.3–10μM increasing and 100μM attenuating its activity. Dephosphorylation of MMP-2 with alkaline phosphatase (20min, 37°C) significantly increased its activity, either with or without ONOO−. Glutathione (GSH, 30μM) without or with 100μM ONOO−, decreased MMP-2 activity. Treatment of MMP-2 with 0.3μM ONOO− in the presence of 30μM glutathione increased its activity and even moreso its dephosphorylated form. GSH did not significantly affect MMP-2 activity with 1–10μM ONOO−. With 100μM ONOO−, dephosphorylation partially protected MMP-2 from the attenuation of its activity. These results suggest that ONOO− activation (at low μM) and inactivation (at high μM) of 72kDa MMP-2, in the presence or absence of glutathione, is further modulated by its phosphorylation status. This may be relevant to pathophysiological conditions associated with increased oxidative stress and intracellular activation of MMP-2. Grant support from the CIHR.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.002
Threshold uncertainty score0.007

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0010.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.001
Insufficient payload (model declined to judge)0.0020.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.023
GPT teacher head0.241
Teacher spread0.218 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2011
Admission routes2
Has abstractyes

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