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Record W3179163382 · doi:10.1093/ajcn/nqab223

A guide for authors and readers of the American Society for Nutrition Journals on the proper use of P values and strategies that promote transparency and improve research reproducibility

2021· article· en· W3179163382 on OpenAlexaff
John D. Sorkin, Mark Manary, Paul A.M. Smeets, Amanda J MacFarlane, Arne Astrup, Ronald L. Prigeon, Beth B. Murinson, Jack Odle, Teresa A. Davis, Katherine L. Tucker, Christopher Duggan, Deirdre K. Tobias

Bibliographic record

VenueAmerican Journal of Clinical Nutrition · 2021
Typearticle
Languageen
FieldDecision Sciences
TopicMeta-analysis and systematic reviews
Canadian institutionsCarleton UniversityHealth Canada
FundersNational Institute of Diabetes and Digestive and Kidney DiseasesNational Institute on AgingU.S. Department of Veterans Affairs
KeywordsTransparency (behavior)PsychologyComputer scienceAccountingPolitical scienceLawBusiness

Abstract

fetched live from OpenAlex

Two questions regarding the scientific literature have become grist for public discussion: 1) what place should P values have in reporting the results of studies? 2) How should the perceived difficulty in replicating the results reported in published studies be addressed? We consider these questions to be 2 sides of the same coin; failing to address them can lead to an incomplete or incorrect message being sent to the reader. If P values (which are derived from the estimate of the effect size and a measure of the precision of the estimate of the effect) are used improperly, for example reporting only significant findings, or reporting P values without account for multiple comparisons, or failing to indicate the number of tests performed, the scientific record can be biased. Moreover, if there is a lack of transparency in the conduct of a study and reporting of study results, it will not be possible to repeat a study in a manner that allows inferences from the original study to be reproduced or to design and conduct a different experiment whose aim is to confirm the original study's findings. The goal of this article is to discuss how P values can be used in a manner that is consistent with the scientific method, and to increase transparency and reproducibility in the conduct and analysis of nutrition research.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.186
metaresearch head score (Gemma)0.596
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesMetaresearch
Consensus categoriesnone
DomainCandidate signal: Reproducibility · Consensus signal: none
Study designCandidate signal: Not applicable · Consensus signal: Not applicable
GenreCandidate signal: Methods · Consensus signal: none
Teacher disagreement score0.814
Threshold uncertainty score0.984

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.1860.596
Meta-epidemiology (narrow)0.0040.005
Meta-epidemiology (broad)0.0060.005
Bibliometrics0.0300.033
Science and technology studies0.0040.009
Scholarly communication0.0120.014
Open science0.0090.007
Research integrity0.0200.029
Insufficient payload (model declined to judge)0.0440.080

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.883
GPT teacher head0.639
Teacher spread0.243 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

Study designNot applicable
DomainReproducibility
GenreMethods

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations16
Published2021
Admission routes1
Has abstractyes

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