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Record W3184687944 · doi:10.2326/osj.20.149

Landscape Genetics of Hume's Pheasant Syrmaticus humiae: Rivers Act as Potential Genetic Barriers

2021· article· en· W3184687944 on OpenAlexaff
Yongjian Bei, Jieling Lai, Kathy Martin, Weicai Chen

Bibliographic record

VenueORNITHOLOGICAL SCIENCE · 2021
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicGenetic diversity and population structure
Canadian institutionsUniversity of British Columbia
Fundersnot available
KeywordsPheasantBiological dispersalGenetic diversityPopulationPopulation bottleneckEcologyGeographyGene flowBiologyGenetic structureZoologyMicrosatelliteDemographyGeneticsAllele

Abstract

fetched live from OpenAlex

Landscape features, such as rivers, can act as geographical barriers to dispersal and gene flow and thus influence the population structure of some species. In this study, tissue samples were collected from 73 Hume's Pheasant Syrmaticus humiae, from six localities in Guangxi and Guizhou provinces, China, to examine the influence of rivers in landscape structure on genetic diversity and structure based on 12 microsatellite loci. Results indicated a high genetic diversity in Hume's Pheasant. Individuals from populations in Tianlin, Longlin and Xilin counties (TXL) (three geographically proximate populations) tended to form a genetic cluster, distinct from three other geographically proximate populations 100 km to the west in Pojie town (PJ), Luodian county (LD) and Leye county (LX), which showed more mixing and were less genetically distinct. Using simulated Markov-switching VAR (MSVAR), we found that the median population sizes of the posterior distributions were approximately 3,715 individuals for N0, and approximately 100,000 for N1, indicating that Hume's Pheasant experienced a significant genetic bottleneck 4,800 years ago, possibly due to human activity. Hume's Pheasant shows female-biased dispersal. The results of STRUCTURE and GENELAND indicate that Nanpan River, Hongshui River and national road G324 act as potential genetic barriers for Hume's Pheasant in Guangxi and Guizhou provinces. In addition, genetic distinctiveness has persisted despite population declines of the Hume's Pheasant due to the bottleneck approximately 5,000 years ago and population declines in the last 100 years.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: Observational
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.004
Threshold uncertainty score0.008

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0010.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0010.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.009
GPT teacher head0.245
Teacher spread0.237 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations2
Published2021
Admission routes1
Has abstractyes

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