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Record W3186574447 · doi:10.1002/mds.28732

A Multi‐center Genome‐wide Association Study of Cervical Dystonia

2021· article· en· W3186574447 on OpenAlexaff
Yan V. Sun, Chengchen Li, Qin Hui, Yunfeng Huang, Richard L. Barbano, Ramon L. Rodriguez, Irene A. Malaty, Stephen G. Reich, Kimberly Bambarger, Katie Holmes, Joseph Jankovic, Neepa Patel, Emmanuel Roze, Marie Vidailhet, Brian D. Berman, Mark S. LeDoux, Alberto J. Espay, Pinky Agarwal, Sarah Pirio‐Richardson, Samuel Frank, William G. Ondo, Rachel Saunders‐Pullman, Sylvain Chouinard, Natividad Stover, Alfredo Berardelli, Alexander Pantelyat, Allison Brashear, Susan H. Fox, Meike Kasten, Ulrike M. Krämer, Miriam Neis, Tobias Bäumer, Sebastian Loens, Max Borsche, Simone Zittel, Antonia Maurer, Mathias Gelderblom, Jens Volkmann, Thorsten Odorfer, Andrea A. Kühn, Friederike Borngräber, Inke R. König, Carlos Cruchaga, Adam C. Cotton, Gamze Kilic‐Berkmen, Alan Freeman, Stewart A. Factor, Laura Scorr, J. Douglas Bremner, Viola Vaccarino, Arshed A. Quyyumi, Christine Klein, Joel S. Perlmutter, Katja Lohmann, Hyder A. Jinnah

Bibliographic record

VenueMovement Disorders · 2021
Typearticle
Languageen
FieldMedicine
TopicBotulinum Toxin and Related Neurological Disorders
Canadian institutionsToronto Western HospitalUniversity of TorontoCentre Hospitalier de l’Université de Montréal
FundersNational Institute on Drug AbuseNational Center for Advancing Translational SciencesNational Institute of Neurological Disorders and StrokeNational Institute of Mental HealthCalifornia Department of Fish and Game
KeywordsCervical dystoniaDystoniaCenter (category theory)MedicineAssociation (psychology)Physical medicine and rehabilitationPsychologyPsychiatryPsychotherapist

Abstract

fetched live from OpenAlex

ABSTRACT Background Several monogenic causes for isolated dystonia have been identified, but they collectively account for only a small proportion of cases. Two genome‐wide association studies have reported a few potential dystonia risk loci; but conclusions have been limited by small sample sizes, partial coverage of genetic variants, or poor reproducibility. Objective To identify robust genetic variants and loci in a large multicenter cervical dystonia cohort using a genome‐wide approach. Methods We performed a genome‐wide association study using cervical dystonia samples from the Dystonia Coalition. Logistic and linear regressions, including age, sex, and population structure as covariates, were employed to assess variant‐ and gene‐based genetic associations with disease status and age at onset. We also performed a replication study for an identified genome‐wide significant signal. Results After quality control, 919 cervical dystonia patients compared with 1491 controls of European ancestry were included in the analyses. We identified one genome‐wide significant variant (rs2219975, chromosome 3, upstream of COL8A1 , P ‐value 3.04 × 10 −8 ). The association was not replicated in a newly genotyped sample of 473 cervical dystonia cases and 481 controls. Gene‐based analysis identified DENND1A to be significantly associated with cervical dystonia ( P ‐value 1.23 × 10 −6 ). One low‐frequency variant was associated with lower age‐at‐onset (16.4 ± 2.9 years, P ‐value = 3.07 × 10 −8 , minor allele frequency = 0.01), located within the GABBR2 gene on chromosome 9 (rs147331823). Conclusion The genetic underpinnings of cervical dystonia are complex and likely consist of multiple distinct variants of small effect sizes. Larger sample sizes may be needed to provide sufficient statistical power to address the presumably multi‐genic etiology of cervical dystonia. © 2021 International Parkinson and Movement Disorder Society

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: Observational
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.010
Threshold uncertainty score0.580

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0010.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.014
GPT teacher head0.258
Teacher spread0.244 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations9
Published2021
Admission routes1
Has abstractyes

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