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Record W3194675136 · doi:10.5376/bm.2021.12.0005

Expression Analysis of miR393 and Target Gene <i>Ve</i> of <i>Solanum torvum</i> Swartz Infected by <i>Verticillium dahliae</i> Kleb

2021· article· en· W3194675136 on OpenAlexvenueno aff
Yalong Qin, Zhanhui Jia, Zhong Wang, Xiaochun Shu, Weibing Zhuang, Peng Feng

Bibliographic record

VenueBioscience Methods · 2021
Typearticle
Languageen
FieldAgricultural and Biological Sciences
TopicPlant-Microbe Interactions and Immunity
Canadian institutionsnot available
Fundersnot available
KeywordsBiologyVerticillium dahliaeGeneGeneticsBotany

Abstract

fetched live from OpenAlex

In this study, Solanum torvum Swartz. was used as material and B-Actin gene and U6 were used as internal references. First, the expression characteristics analysis of miR393 and target gene Ve were performed on the root, stem, leaf, flower and fruit of Solanum torvum Swartz. during flowering and fruiting stage. The strong Verticillium dahliae Kleb. were inoculated into Solanum torvum Swartz. during 5-6 leaf stage, and the control group was treated with ultrapure water. The Solanum torvum Swartz. roots were taken at 0 h, 3 h, 6 h, 12 h, 24 h, 36 h, 48 h and 72 h for expression analysis of infection by Verticillium dahliae Kleb.. The results showed that under normal growth conditions, miR393 and target gene Ve had specific expression patterns in different tissues of Solanum torvum Swartz., and the differential expression was significant. Both miR393 and target gene Ve had the highest expression levels in roots, followed by stems, and had the lowest levels in fruits. After infection by Verticillium dahliae Kleb., both miR393 and target gene Ve had certain expression in different infection periods. The expression of target gene Ve showed an upward tendency with the extension of infection time, and the highest expression level appeared at 48 h, followed by 72 h. While the expression of miR393 showed a downward tendency with the extension of infection time, and the highest expression level appeared at 6 h. The expression of miR393 and target gene Ve showed opposite tendencies in different infection periods. These results provided a foundation for further research on the interaction mechanism between miR393 and target gene Ve and the molecular mechanism of resistance to Verticillium wilt.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.001
Threshold uncertainty score0.004

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.001
Insufficient payload (model declined to judge)0.0010.001

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.023
GPT teacher head0.281
Teacher spread0.258 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2021
Admission routes1
Has abstractyes

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