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Epidemiology, clinical features and outcomes of incident tuberculosis in children in Canada in 2013–2016: results of a national surveillance study

2021· article· en· W3195256681 on OpenAlexafffundabout
Shaun K. Morris, Ryan Giroux, Raquel Consunji‐Araneta, Kristoffor Stewart, Maureen Baikie, Fatima Kakkar, David Zielinski, Alena Tse‐Chang, Victoria J. Cook, Dina A. Fisher, Marina I. Salvadori, Jeffrey M. Pernica, Laura Sauvé, Charles Hui, Amber Miners, Gonzalo G. Alvarez, Assaad Al-Azem, V Gallant, Barbara Grueger, Ray Lam, Joanne M. Langley, N Radziminski, Elizabeth Rea, Sam Wong, Ian Kitai

Bibliographic record

VenueArchives of Disease in Childhood · 2021
Typearticle
Languageen
FieldMedicine
TopicTuberculosis Research and Epidemiology
Canadian institutionsGovernment of Northwest TerritoriesIzaak Walton Killam Health CentreToronto Public HealthHealth CanadaSaskatchewan Health AuthorityCentre Hospitalier Universitaire Sainte-JustineOttawa HospitalUniversity of ManitobaChildren's Hospital of Eastern OntarioB.C. Women's Hospital & Health CentreMcMaster UniversityLondon Health Sciences CentreUniversity of CalgaryBC Centre for Disease ControlDalhousie UniversityUniversity of OttawaPublic Health Agency of CanadaMcGill University Health CentreSickKids FoundationAlberta Health ServicesUniversity of TorontoMontreal Children's HospitalNunavut Research InstituteUniversity of British ColumbiaUniversity of SaskatchewanGovernment of NunavutHospital for Sick ChildrenUniversity of Alberta
FundersHospital for Sick ChildrenPublic Health AgencyPublic Health Agency of Canada
KeywordsMedicineTuberculosisEpidemiologyPediatricsIncidence (geometry)DiseasePathology

Abstract

fetched live from OpenAlex

PURPOSE: Childhood tuberculosis disease is difficult to diagnose and manage and is an under-recognised cause of morbidity and mortality. Reported data from Canada do not focus on childhood tuberculosis or capture key epidemiologic, clinical and microbiologic details. The purpose of this study was to assess demographics, presentation and clinical features of childhood tuberculosis in Canada. METHODS: We conducted prospective surveillance from 2013 to 2016 of over 2700 paediatricians plus vertical tuberculosis programmes for incident tuberculosis disease in children younger than 15 years in Canada using the Canadian Paediatric Surveillance Program (CPSP). RESULTS: In total, 200 cases are included in this study. Tuberculosis was intrathoracic in 183 patients of whom 86% had exclusively intrathoracic involvement. Central nervous system tuberculosis occurred in 16 cases (8%). Fifty-one per cent of cases were hospitalised and 11 (5.5%) admitted to an intensive care unit. Adverse drug reactions were reported in 9% of cases. The source case, most often a first-degree relative, was known in 73% of cases. Fifty-eight per cent of reported cases were Canadian-born Indigenous children. Estimated study rates of reported cases (per 100 000 children per year) were 1.2 overall, 8.6 for all Indigenous children and 54.3 for Inuit children. CONCLUSION: Childhood tuberculosis may cause significant morbidity and resource utilisation. Key geographies and groups have very high incidence rates. Elimination of childhood tuberculosis in Canada will require well-resourced community-based efforts that focus on these highest risk groups.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.002
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: Observational
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.026
Threshold uncertainty score0.186

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0010.002
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.001
Bibliometrics0.0020.005
Science and technology studies0.0020.001
Scholarly communication0.0010.000
Open science0.0010.001
Research integrity0.0000.001
Insufficient payload (model declined to judge)0.0010.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.023
GPT teacher head0.352
Teacher spread0.329 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations10
Published2021
Admission routes3
Has abstractyes

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