MétaCan
Menu
← Back to cohort
Record W3196754571 · doi:10.7554/elife.66877.sa2

Author response: Vision, challenges and opportunities for a Plant Cell Atlas

2021· peer-review· en· W3196754571 on OpenAlexaff
Jahed Ahmed, Oluwafemi Alaba, Gazala Ameen, Vaishali Arora, Mario A Arteaga-Vazquez, Alok Arun, Julia Bailey-Serres, Laura Bartley, George W. Bassel, Dominique C. Bergmann, Edoardo Bertolini, Kaushal Kumar Bhati, Noel Blanco‐Touriñán, Steven P. Briggs, Javier Brumós, Benjamin Buer, Adrien Burlaocot, Sergio Alan Cervantes-Pérez, Sixue Chen, Bruno Contreras‐Moreira, Francisco J. Corpas, Alfredo Cruz‐Ramírez, Cesar L. Cuevas‐Velazquez, Josh T. Cuperus, Lisa I David, Stefan de Folter, Peter Denolf, Pingtao Ding, William P. Dwyer, Matthew M. S. Evans, Nancy George, Pubudu Handakumbura, Maria J Harrison, Elizabeth S. Haswell, Venura Herath, Yuling Jiao, Robert E. Jinkerson, Uwe John, Sanjay Joshi, Abhishek Joshi, Lydia‐Marie Joubert, Ramesh Katam, Harmanpreet Kaur, Yana Kazachkova, Sunil K. Kenchanmane Raju, Mather Ali Khan, Rajdeep S. Khangura, Ajay Kumar, Arun Kumar, Pankaj Kumar, Pradeep Kumar, Dhruv Lavania, Tedrick Thomas Salim Lew, Mathew G. Lewsey, Chien-Yuan Lin, Dianyi Liu, Le Liu, Tie Liu, Ansul Lokdarshi, Ai My Luong, Iain C. Macaulay, Sakil Mahmud, Ari Pekka Mähönen, Kamal Kumar Malukani, Alexandre P. Marand, Carly A Martin, Claire D. McWhite, Devang Mehta, Miguel Miñambres Martín, Jenny C. Mortimer, Lachezar A. Nikolov, Tatsuya Nobori, Trevor M. Nolan, Aaron J. Ogden, Marisa S. Otegui, Mark‐Christoph Ott, José M. Palma, Puneet Paul, Atique ur Rehman, Maida Romera‐Branchat, Luís C. Romero, Ronelle Roth, Saroj Kumar Sah, Rachel Shahan, Shyam Solanki, Bao‐Hua Song, Rosangela Sozzani, Gary Stacey, Anna N. Stepanova, Nicolas L. Taylor, Marcela K Tello-Ruiz, Tuan M. Tran, Rajiv Kumar Tripathi, Batthula Vijaya Lakshmi Vadde, Tamás Varga, Marija Vidović, Justin W. Walley, Zhiyong Wang, Renate Weizbauer, James Whelan, Asela Wijeratne, T. Xiang, Shou‐Ling Xu, Ramin Yadegari, Houlin Yu, Hai Ying Yuan, Fabio Zanini, Feng Zhao, Jie Zhu, Xiaohong Zhuang, Suryatapa Ghosh Jha, Alexander Borowsky, Benjamin Cole, Noah Fahlgren, Andrew Farmer, Shao‐shan Carol Huang, Purva Karia, Marc Libault, Nicholas J. Provart, Selena L. Rice, Maite Saura-Sánchez, Pinky Agarwal, Amir Ahkami, Christopher Anderton, Jennifer A. N. Brophy, Luigi Di Costanzo, Moisés Expósito‐Alonso, Stefania Giacomello, Fabio Gómez-Cano, Kerstin Kaufmann, Dae Kwan Ko, Sagar Kumar, Andrey V. Malkovskiy, Naomi Nakayama, Toshihiro Obata, Gergő Pálfalvi, Elsa H Quezada-Rodríguez, Rajveer Singh, R. Glen Uhrig, Jamie Waese, Klaas J. van Wijk, R Clay Wright, David W. Ehrhardt, Kenneth D. Birnbaum, Seung Y. Rhee

Bibliographic record

Venuenot available
Typepeer-review
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicPlant Pathogens and Fungal Diseases
Canadian institutionsUniversity of TorontoUniversity of ManitobaUniversity of SaskatchewanUniversity of Alberta
Fundersnot available
KeywordsAtlas (anatomy)BiologyComputational biologyData scienceNeuroscienceComputer scienceCognitive scienceCartographyGeographyPsychologyAnatomy

Abstract

fetched live from OpenAlex
No abstract in any covered source. Its absence is recorded, not treated as a negative.

No abstract. This is not a gap in this database; OpenAlex has none either. 23.3% of the frame is in this state, and the screen finds HALF as much metaresearch here, so the absence is a measured bias rather than a missing field.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.009
metaresearch head score (Gemma)0.047
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Not applicable · Consensus signal: Not applicable
GenreCandidate signal: Commentary · Consensus signal: Commentary
Teacher disagreement score0.170
Threshold uncertainty score0.569

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0090.047
Meta-epidemiology (narrow)0.0010.000
Meta-epidemiology (broad)0.0010.001
Bibliometrics0.0020.001
Science and technology studies0.0030.003
Scholarly communication0.0090.007
Open science0.0020.005
Research integrity0.0080.008
Insufficient payload (model declined to judge)0.1700.098

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.086
GPT teacher head0.313
Teacher spread0.227 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designNot applicable
Domainnot available
GenreCommentary

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations1
Published2021
Admission routes1
Has abstractno

Explore more

Same topicPlant Pathogens and Fungal Diseases→French-language works237,207→