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Record W3197709450

Identification of Maize Aquaporin Gene ZmPIP4c as a Signature of C4 Traits

2020· article· en· W3197709450 on OpenAlexvenueno aff
Xiang Li, Yuling Liang, Zhiying Ma, Zheng Liu

Bibliographic record

VenueMaize Genomics and Genetics · 2020
Typearticle
Languageen
FieldAgricultural and Biological Sciences
TopicPlant nutrient uptake and metabolism
Canadian institutionsnot available
Fundersnot available
KeywordsPhosphoenolpyruvate carboxylaseVascular bundleAquaporinGene expressionGenePhotosynthesisBiologyC4 photosynthesisCrassulacean acid metabolismRuBisCOBiochemistryWater transportBotanyRegulation of gene expressionPlant physiologyNAD+ kinaseCell biologyEnzymeWater flow
DOInot available

Abstract

fetched live from OpenAlex

As a water transmembrane transporter, aquaporin can not only transport water in plants, but also transport small molecules such as CO 2 and H 2 O 2 , thus affecting physiological processes such as photosynthesis and so on. Although photosynthesis is critical to plant growth, the photosynthetic mechanisms of C 3 plants are different from that of C 4 plants as compared with C 3 leaves, C 4 leaves have typical Kranz structure and possess larger and well-developed bundle sheath cells which is favorable for water storage. We therefore performed bioinformatic and gene expression analyses on C 4 maize aquaporin, and identified a gene called ZmPIP4c which shows high specific expression in bundle sheath cells in leaves. thus is conducive to water transport into sheath cells and to balance the water supply in mesophyll cells. Further expression analysis on the ZmPIP4c along leaf gradient revealed that the expression trend of this gene was not only consistent with that of C 4 marker gene - NAD-malic enzyme gene ( NAD-ME ), a gene usually used to screen C 4 photosynthesis related transcripts, but also consistent with other C 4 genes such as phosphoenolpyruvate carboxylase gene ( PEPC ) and carbonic anhydrase gene ( CA ). The expressions of these genes all showed gradual increase from leaf base to leaf tip, suggesting that ZmPIP4c is a signature of C 4 traits. In addition, ZmPIP4c , NAD-ME , PEPC and CA also showed similar expression trends under the regulation of circadian rhythm, indicating that ZmPIP4c can provide optimal water environment for the efficient operation of C 4 cycle in bundle sheath cells under light, and avoid energy and water waste under dark. Moreover, the expressions of ZmPIP4c gene and of mesophyll-specifically-expressed genes, PEPC and CA , were all down-regulated under salt stress. As there exists water conduction signal between bundle sheath cells and mesophyll cells, down-regulation of ZmPIP4c gene may change the inner water solution environment within mesophyll cells, thereafter affecting the expresions of PEPC and CA genes. In brief, our study on ZmPIP4c gene of maize provides us a signature gene to study new C 4 traits that have not been reported yet, and helps us to understand the molecular mechanism how the cell-specific aquaporin gene mediates the C 4 cycle.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.225
Threshold uncertainty score0.212

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.016
GPT teacher head0.196
Teacher spread0.180 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations1
Published2020
Admission routes1
Has abstractyes

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