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Record W3199114996 · doi:10.1186/s13073-021-00961-4

Correction to: Genome-wide sequencing as a first-tier screening test for short tandem repeat expansions

2021· erratum· en· W3199114996 on OpenAlexafffundabout
Indhu‐Shree Rajan‐Babu, Junran J. Peng, Readman Chiu, Imagine Study, Jan M. Friedman

Bibliographic record

VenueGenome Medicine · 2021
Typeerratum
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicGenomics and Phylogenetic Studies
Canadian institutionsChildren's & Women's Health Centre of British ColumbiaCanada's Michael Smith Genome Sciences CentreUniversity of British ColumbiaBC Cancer AgencyBC Children's Hospital
FundersGenome British ColumbiaCompute CanadaBC Children's HospitalChildren's Hospital Foundation
KeywordsHuman geneticsComputational biologyComputer scienceTest (biology)Tandem repeatWhole genome sequencingGenomeGeneticsBiologyBioinformaticsGene

Abstract

fetched live from OpenAlex

It was highlighted that in the original article [1] the list of the authors belonging in the IMAGINE and CAUSES Study were erroneously interchanged. The original article has been updated. Acknowledgements We would like to thank all the CAUSES and IMAGINE Study investigators. CAUSES Study investigators include Shelin Adam, Christele Du Souich, Alison Elliott, Anna Lehman, Jill Mwenifumbo, Tanya Nelson, Clara van Karnebeek, Rajan-Babu et al. Genome Medicine (2021) 13:126 Page 13 of 15 and Jan Friedman. The CAUSES Study is funded by Mining for Miracles, British Columbia Children’s Hospital Foundation, and Genome British Columbia. IMAGINE Study investigators include Patricia Birch, Madeline Couse, Colleen Guimond, Anna Lehman, Jill Mwenifumbo, Clara van Karnebeek, and Jan Friedman. We thank Compute Canada for the Research Allocation Competitions allocation, which facilitated our analysis of the IMAG INE and EGA genomes, and Julia Handra for coordinating the STR molecular testing of the clinical samples.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.002
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesMeta-epidemiology (narrow)
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Not applicable · Consensus signal: Not applicable
GenreCandidate signal: Other · Consensus signal: none
Teacher disagreement score0.552
Threshold uncertainty score1.000

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.002
Meta-epidemiology (narrow)0.0010.001
Meta-epidemiology (broad)0.0010.000
Bibliometrics0.0000.000
Science and technology studies0.0010.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0010.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.023
GPT teacher head0.266
Teacher spread0.243 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

Study designNot applicable
Domainnot available
GenreOther

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations2
Published2021
Admission routes3
Has abstractyes

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