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Record W3200248150 · doi:10.1073/pnas.2100338118

Modern Siberian dog ancestry was shaped by several thousand years of Eurasian-wide trade and human dispersal

2021· article· en· W3200248150 on OpenAlexafffund
Tatiana R. Feuerborn, Alberto Carmagnini, Robert J. Losey, Tatiana Nomokonova, Arthur Askeyev, Igor Askeyev, Oleg Askeyev, Ekaterina Antipina, Martin Appelt, Olga P. Bachura, Fiona Beglane, Daniel G. Bradley, Kevin G. Daly, Shyam Gopalakrishnan, Kristian Murphy Gregersen, Chunxue Guo, А. В. Гусев, Carleton Jones, П. А. Косинцев, Yaroslav V. Kuzmin, Valeria Mattiangeli, Angela Perri, Andreĭ V. Plekhanov, Jazmín Ramos‐Madrigal, Anne Lisbeth Schmidt, Dilyara N. Shaymuratova, Oliver Smith, Lilia V. Yavorskaya, Guojie Zhang, Eske Willerslev, Morten Meldgaard, M. Thomas P. Gilbert, Greger Larson, Love Dalén, Anders J. Hansen, Mikkel‐Holger S. Sinding, Laurent Frantz

Bibliographic record

VenueProceedings of the National Academy of Sciences · 2021
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicYersinia bacterium, plague, ectoparasites research
Canadian institutionsUniversity of SaskatchewanUniversity of Alberta
FundersFP7 Ideas: European Research CouncilHorizon 2020Natural Environment Research CouncilSocial Sciences and Humanities Research Council of CanadaRussian Academy of SciencesHorizon 2020 Framework ProgrammeAage og Johanne Louis-Hansens FondNovo Nordisk FondenLundbeckfondenUral Branch, Russian Academy of SciencesEuropean CommissionUniversity of OxfordResearch Councils UKWellcome TrustSight Research UKGovernment of CanadaQueen Mary University of LondonScience for Life LaboratoryVillum Fonden
KeywordsBiological dispersalGeographyAncient historyBiologyDemographyHistorySociology

Abstract

fetched live from OpenAlex

Dogs have been essential to life in the Siberian Arctic for over 9,500 y, and this tight link between people and dogs continues in Siberian communities. Although Arctic Siberian groups such as the Nenets received limited gene flow from neighboring groups, archaeological evidence suggests that metallurgy and new subsistence strategies emerged in Northwest Siberia around 2,000 y ago. It is unclear if the Siberian Arctic dog population was as continuous as the people of the region or if instead admixture occurred, possibly in relation to the influx of material culture from other parts of Eurasia. To address this question, we sequenced and analyzed the genomes of 20 ancient and historical Siberian and Eurasian Steppe dogs. Our analyses indicate that while Siberian dogs were genetically homogenous between 9,500 to 7,000 y ago, later introduction of dogs from the Eurasian Steppe and Europe led to substantial admixture. This is clearly the case in the Iamal-Nenets region (Northwestern Siberia) where dogs from the Iron Age period (∼2,000 y ago) possess substantially less ancestry related to European and Steppe dogs than dogs from the medieval period (∼1,000 y ago). Combined with findings of nonlocal materials recovered from these archaeological sites, including glass beads and metal items, these results indicate that Northwest Siberian communities were connected to a larger trade network through which they acquired genetically distinctive dogs from other regions. These exchanges were part of a series of major societal changes, including the rise of large-scale reindeer pastoralism ∼800 y ago.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.001
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: Observational
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.005
Threshold uncertainty score0.010

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0010.001
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0010.001
Science and technology studies0.0010.001
Scholarly communication0.0010.001
Open science0.0000.001
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0020.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.029
GPT teacher head0.325
Teacher spread0.296 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations45
Published2021
Admission routes2
Has abstractyes

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Same venueProceedings of the National Academy of SciencesSame topicYersinia bacterium, plague, ectoparasites researchFrench-language works237,207