MétaCan
Menu
Back to cohort
Record W3210109743 · doi:10.5281/zenodo.3596024

FAIRplus: D1.2 Selection criteria and guidelines for data sources from IMI projects and EFPIA internal databases

2019· report· en· W3210109743 on OpenAlexaff
Philip Gribbon, Wei Gu, Ferrán Sanz, Vassilios Ioannidis, Ola Engkvist, David Henderson, Dorothy Reilly, Philippe Rocca‐Serra, Andrea Zaliani, Gesa Witt, Manfred Köhler, Robert T. Giessmann

Bibliographic record

VenueZenodo (CERN European Organization for Nuclear Research) · 2019
Typereport
Languageen
FieldComputer Science
TopicResearch Data Management Practices
Canadian institutionsAstraZeneca (Canada)
FundersHorizon 2020 Framework Programme
KeywordsSelection (genetic algorithm)DatabaseComputer scienceInformation retrievalData miningData scienceArtificial intelligence

Abstract

fetched live from OpenAlex

Creating selection criteria and guidelines, to aid identification of IMI datasets with the potential to generate high societal impact upon FAIRification, is an important goal of FAIRplus. This deliverable report describes the process put in place to identify, evaluate and select projects. Two thirds of projects to be addressed by FAIRplus will cover societal priorities of H2020, namely; 1) promoting healthy ageing[1]; 2) addressing chronic diseases; 3) neurodegenerative diseases and 4) emergence of antibiotic resistance. In addition, we have identified cross-cutting projects “Cross” which provide tools such as cell lines, biomarkers and animal models, which enable research progression in the primary priority areas. In the first period, some 25 projects have been identified based on the application of the criteria and discussions are ongoing with these consortia representatives in order to provide a steady flow of datasets into FAIRplus. [1] see http://ec.europa.eu/programmes/horizon2020/en/h2020-section/health-demographic-change-and-wellbeing

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.145
metaresearch head score (Gemma)0.337
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesOpen science
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Not applicable · Consensus signal: Not applicable
GenreCandidate signal: Methods · Consensus signal: none
Teacher disagreement score0.993
Threshold uncertainty score0.767

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.1450.337
Meta-epidemiology (narrow)0.0020.004
Meta-epidemiology (broad)0.0030.005
Bibliometrics0.0210.019
Science and technology studies0.0040.002
Scholarly communication0.0200.008
Open science0.0070.016
Research integrity0.0050.004
Insufficient payload (model declined to judge)0.1510.108

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.383
GPT teacher head0.419
Teacher spread0.036 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

Study designNot applicable
Domainnot available
GenreMethods

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2019
Admission routes1
Has abstractyes

Explore more

Same venueZenodo (CERN European Organization for Nuclear Research)Same topicResearch Data Management PracticesFrench-language works237,207