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Record W3212234179 · doi:10.3389/fmars.2021.766282

Sequestration and Cyanobacterial Diet Preferences in the Opisthobranch Molluscs Dolabrifera nicaraguana and Stylocheilus rickettsi

2021· article· en· W3212234179 on OpenAlexafffund
Angela Capper, Wei-Ting Liu, Amanda M. Fenner, Alejandro Almanza, Gina Della Togna, Liuris Herrera, Timothy Johns, Valerie J. Paul, Pieter C. Dorrestein, Todd L. Capson, Marcy J. Balunas

Bibliographic record

VenueFrontiers in Marine Science · 2021
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicMarine Sponges and Natural Products
Canadian institutionsMcGill University
FundersNatural Sciences and Engineering Research Council of CanadaSmithsonian Tropical Research InstituteUniversidad de GuadalajaraFogarty International CenterMcGill UniversityUniversity of California, San DiegoSmithsonian Institution
KeywordsLyngbyaBiologyPanamaCyanobacteriaZoologyEcologyBacteria

Abstract

fetched live from OpenAlex

A multidisciplinary approach was used to assess chemical ecological dietary interactions between marine organisms as a tool to isolate novel ecologically relevant compounds with biotechnological potential. First, laboratory-based feeding preference assays of the sea hareDolabrifera nicaraguana(previously known asD. dolabrifera), an anaspidean mollusc, were conducted by simultaneously offering six food options collected from nearby tidal pools in the Coiba National Park in the Tropical Eastern Pacific of Panama. An evaluation of preferred dietary repertoire revealedD. nicaraguanasignificantly preferred cf.Lyngbyasp. over the cyanobacteriumSymplocasp., green algaChaetomorphasp., and red algaSpyridiasp. A no-choice feeding assay using cf.Lyngbyasp. or green algaCladophorasp. supported this finding. Secondly, we conducted bioactivity-guided fractionation using the preferred food source ofD. nicaraguana, the ‘hair-like” cf.Lyngbyasp. from which we also isolated and elucidated two new depsipeptide compounds, veraguamide M (1) and veraguamide N (2). Veraguamides M (1) and N (2) showedin vitroactivity toward the malaria-causing parasitePlasmodium falciparumwith GI50values of 4.2 and 4.3 μM, respectively, and therapeutic windows of 7.0–8.0 (based on moderate cytotoxicities to mammalian Vero cells with GI50values of 29.3 and 34.1 μM, respectively). Veraguamide N (2) was also active againstLeishmania donovani, the causative agent of visceral leishmaniasis, with a GI50value of 6.9 μM. We then evaluated sequestration of these new compounds byD. nicaraguanaused in the feeding assays and found trace amounts of the dietary sequestered compounds. Finally, we evaluated sequestration of these new compounds by the sea hareStylocheilus rickettsi(previously known asS. striatus) that were grazing on the cf.Lyngbyasp. used in the feeding assays and found both to be sequestered. This study is the first example whereby compounds with significant activity against tropical parasites have been found in both the sea hareS. rickettsiand its cyanobacterial food source. These results suggest that chemical ecological studies involving sea hares and cyanobacteria continue to provide a diverse source of bioactive compounds with biotechnological potential.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.006
Threshold uncertainty score0.012

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.008
GPT teacher head0.239
Teacher spread0.231 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations4
Published2021
Admission routes2
Has abstractyes

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