MétaCan
Menu
Back to cohort

Abstract 19809: Interferon Regulatory Factor 2 Binding Protein 2 Inhibits Macrophage Inflammation and Reduces Susceptibility to Atherosclerosis in Mice and Humans

2015· article· en· W3212288609 on OpenAlexaff
Ragnar O. Vilmundarson, Hsiao‐Huei Chen, Kianoosh Keyhanian, Xun Zhou, Majid Nikpay, Shelly A. Cruz, Nihar R. Pandey, Naif A. M. Almontashiri, Nida Yap, Tiffany C. Ho, Chloe Stewart, Hua Huang, Aswin Hari, Michèle Geoffrion, Ruth McPherson, Katey J. Rayner, Alexandre F.R. Stewart

Bibliographic record

VenueCirculation · 2015
Typearticle
Languageen
FieldMedicine
TopicLipid metabolism and disorders
Canadian institutionsUniversity of Ottawa
Fundersnot available
KeywordsMacrophage polarizationMedicineInflammationImmunologySingle-nucleotide polymorphismMacrophageMolecular biologyBiologyGenotypeGeneGenetics

Abstract

fetched live from OpenAlex

Introduction: Genetic variants near the gene encoding the transcription cofactor Interferon Regulatory Factor 2 Binding Protein 2 (IRF2BP2) have been tied to ischemic heart disease progression and elevated serum cholesterol. Expression of IRF2BP2 is suppressed in inflammatory macrophages, but the significance of this down-regulation was not known. Hypothesis: This study sought to determine the function of IRF2BP2 in macrophages and its effect on atherosclerosis in mice and humans. Methods and Results: We generated mice that delete IRF2BP2 in macrophages (LysMCre/IRF2BP2flox). IRF2BP2-deficient macrophages increased atherosclerosis in irradiated LDL-receptor null recipient mice and in ApoE null mice. Atherosclerosis was associated with a skewed inflammatory macrophage polarization and increased foam cell formation. Microarray analysis revealed and promoter studies confirmed that the anti-inflammatory transcription factor KLF2 is a target of IRF2BP2, indicating an important role for IRF2BP2 in macrophage polarization. A deletion polymorphism (rs3045215) in the 3’ untranslated sequence of human IRF2BP2 mRNA was examined for its effect on protein expression and on the susceptibility to coronary artery disease (CAD) risk in a cohort of 1,066 angiographic cases and 1,011 controls. Homozygous carriers of this deletion had lower IRF2BP2 (and its target KLF2) protein levels in peripheral blood mononuclear cells and a higher risk of CAD (recessive model, odds ratio (95%CI) = 1.560 (1.179-2.065), p=1.73E-03). The effect of this deletion to suppress protein expression was confirmed with luciferase reporter studies. Haplotype phasing identified two surrogate SNPs in modest LD (rs1887917, r2= 0.755 and rs632180, r2=0.614) that also associated with CAD in a recessive model. These SNPs are being tested for association with CAD in a large international consortium. Conclusion: Ablation of IRF2BP2 in macrophages worsens atherosclerosis in mice and a deletion variant that lowers IRF2BP2 expression predisposes to CAD in humans.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.006
Threshold uncertainty score0.021

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0010.000
Meta-epidemiology (broad)0.0010.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.001
Insufficient payload (model declined to judge)0.0060.002

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.036
GPT teacher head0.274
Teacher spread0.237 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2015
Admission routes1
Has abstractyes

Explore more

Same venueCirculationSame topicLipid metabolism and disordersFrench-language works237,207