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Record W3213121114

RYR2 phosphomutants show that the tetramers and the junctional sarcoplasmic reticulum form a structural syncytium.

2021· article· en· W3213121114 on OpenAlexaff
Parisa Asghari, David R.L. Scriven, Saba Shahrasebi, Edwin D.W. Moore

Bibliographic record

VenueThe Journal of General Physiology · 2021
Typearticle
Languageen
FieldMedicine
TopicCardiac electrophysiology and arrhythmias
Canadian institutionsUniversity of British Columbia
Fundersnot available
KeywordsEndoplasmic reticulumRyanodine receptor 2BiophysicsChemistryRyanodine receptorSyncytiumTetramerPhosphorylationCell biologyBiologyBiochemistryCell
DOInot available

Abstract

fetched live from OpenAlex

We previously showed that RYR2 tetramers are distributed nonuniformly within ventricular dyads, and that physiological and pathological factors can alter their relative positions. Agents that decreased Ca2+ spark frequency, high Mg2+, and saturating concentrations of the immunophilins FKBP12 and FKBP12.6 drew the receptors together, minimizing their nearest-neighbor distance and reducing the size of the clusters. Activating kinases with a phosphorylation cocktail did the opposite. The purpose of this study is to test the hypothesis that phosphorylation of RYR2 is required for the structural changes we have observed. We measured junctional sarcoplasmic reticulum (jSR) lengths using 2-D transmission electron microscopy (TEM) and directly visualized RYR2 distribution using dual-tilt electron tomography in phosphomutant mice S2808A, S2814A, S2814D, and S2030A. Mouse hearts were hung on a Langendorff and treated with either saline or 300 nmol/liter isoproterenol (ISO) for 2 min before being fixed and sectioned for analysis. We found that (1) RYR2 distribution in mouse ventricles is comparable to that reported for rats and humans, (2) the response to ISO applied to an intact, beating heart is identical to a phosphorylation cocktail applied to isolated permeabilized myocytes, and (3) all of the mutations produced significant changes in the tetramer arrangements and/or NND relative to wild-type (WT) mice. Our 2-D TEM measurements showed that (1) in WT mice, ISO significantly increased the length of the jSR, (2) ISO significantly increased the jSR lengths of WT, S2814A, and S2808A mice, but not the S2030A mouse, and (3) the jSR length of the S2814D mouse was significantly greater than WT, but not WT + ISO or S2814D + ISO, indicating that a mutation of the RYR2 alone caused a significant change in the jSR length. These results indicate that the tetramers and the jSR form a structural syncytium.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.773
Threshold uncertainty score0.368

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.001
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.001
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.007
GPT teacher head0.235
Teacher spread0.228 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2021
Admission routes1
Has abstractyes

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