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Record W3215384357 · doi:10.1208/s12248-021-00649-y

Anti-drug Antibody Validation Testing and Reporting Harmonization

2021· article· en· W3215384357 on OpenAlexaff
Heather Myler, João Pedras-Vasconcelos, Kelli R. Phillips, Charles Hottenstein, Paul Chamberlain, Viswanath Devanaryan, Carol Gleason, Joanne Goodman, Marta Starcevic Manning, Shobha Purushothama, Susan Richards, Honglue Shen, Jad Zoghbi, Lakshmi Amaravadi, Troy E. Barger, Steven Bowen, Ronald R. Bowsher, Adrienne Clements‐Egan, Dong Geng, Theresa J. Goletz, George R. Gunn, William Hallett, Michael E. Hodsdon, Brian Janelsins, Vibha Jawa, Szilard Kamondi, Susan Kirshner, Daniel Kramer, Meina Liang, Kathryn J. Lindley, Susana Liu, Zhenzhen Liu, Jim McNally, Alvydas Mikulskis, Robert Nelson, Mohsen Rajabi Ahbari, Qiang Qu, Jane Ruppel, Veerle Snoeck, An Song, Haoheng Yan, Mark Ware

Bibliographic record

VenueThe AAPS Journal · 2021
Typearticle
Languageen
FieldImmunology and Microbiology
TopicBiosimilars and Bioanalytical Methods
Canadian institutionsPfizer (Canada)TransCanada (Canada)
Fundersnot available
KeywordsHarmonizationImmunogenicitySample (material)BiotechnologyComputer scienceMedicineChemistryBiologyChromatographyAntibodyImmunology

Abstract

fetched live from OpenAlex

Evolving immunogenicity assay performance expectations and a lack of harmonized anti-drug antibody validation testing and reporting tools have resulted in significant time spent by health authorities and sponsors on resolving filing queries. Following debate at the American Association of Pharmaceutical Sciences National Biotechnology Conference, a group was formed to address these gaps. Over the last 3 years, 44 members from 29 organizations (including 5 members from Europe and 10 members from FDA) discussed gaps in understanding immunogenicity assay requirements and have developed harmonization tools for use by industry scientists to facilitate filings to health authorities. Herein, this team provides testing and reporting strategies and tools for the following assessments: (1) pre-study validation cut point; (2) in-study cut points, including procedures for applying cut points to mixed populations; (3) system suitability control criteria for in-study plate acceptance; (4) assay sensitivity, including the selection of an appropriate low positive control; (5) specificity, including drug and target tolerance; (6) sample stability that reflects sample storage and handling conditions; (7) assay selectivity to matrix components, including hemolytic, lipemic, and disease state matrices; (8) domain specificity for multi-domain therapeutics; (9) and minimum required dilution and extraction-based sample processing for titer reporting.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.483
metaresearch head score (Gemma)0.283
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesMetaresearch
Consensus categoriesMetaresearch
DomainCandidate signal: Reporting · Consensus signal: none
Study designCandidate signal: Not applicable · Consensus signal: none
GenreCandidate signal: Methods · Consensus signal: Methods
Teacher disagreement score0.517
Threshold uncertainty score0.637

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.4830.283
Meta-epidemiology (narrow)0.0010.001
Meta-epidemiology (broad)0.0020.003
Bibliometrics0.0120.007
Science and technology studies0.0020.004
Scholarly communication0.0110.006
Open science0.0100.007
Research integrity0.0030.005
Insufficient payload (model declined to judge)0.0030.003

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.078
GPT teacher head0.350
Teacher spread0.272 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; the direct Gemma label and the distilled Codex classifier agree on what is shown here.

Study designNot applicable
DomainReporting
GenreMethods

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations72
Published2021
Admission routes1
Has abstractyes

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