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Record W3215413483 · doi:10.5539/ijb.v13n2p57

Coinfection of Bartonella spp. and Borrelia Burgdorferi in Ixodes Scapularis Using PCR Assay, a Case Study in Nova Scotia

2021· article· en· W3215413483 on OpenAlexafffundvenueabout
James Kho, Chelsea Colbourne, Emma Bent, Amal El Nabbout, Tatiana Rossolimo

Bibliographic record

VenueInternational Journal of Biology · 2021
Typearticle
Languageen
FieldImmunology and Microbiology
TopicBartonella species infections research
Canadian institutionsDalhousie University
FundersDalhousie University
KeywordsIxodes scapularisBorrelia burgdorferiBartonellaBiologyCoinfectionIxodesLyme diseaseVirologyTickBartonella henselaeMicrobiologyTick-borne diseaseIxodidaeImmunologySerologyVirus

Abstract

fetched live from OpenAlex

Coinfection of vector species can provide more insight into the complex relationship between zoonotic pathogens and its host. Ixodes scapularis (Say) or the deer-tick in particular is an important species in North America because of its exceptional ability as a vector that can transmit zoonotic diseases such as Lyme and Cat Scratch Disease (CSD). In recent years, many studies have suggested a possible link between the coinfection of Borrelia burgdorferi, the causative agent of Lyme, with other tick-borne bacteria such as Bartonella spp., the causative agent of CSD, as partly responsible for the symptoms associated with Chronic Lyme Disease or Post-Treatment Lyme Disease Syndrome. This study investigates the prevalence of Bartonella spp. and Borrelia burgdorferi in Ixodes scapularis using Polymerase Chain Reaction (PCR) assay to potentially find a link between the two of the most common tick-borne pathogens found in Nova Scotia. Standard PCR using primers targeted at the two bacterial species were conducted on 157 I. scapularis ticks collected in Nova Scotia. Overall, we found high prevalence for both bacteria at 75.16% for Bartonella spp. and 47.13% for B. burgdorferi with no significant differences between the sex of the ticks. Interestingly, all the ticks positive for B. burgdorferi were also positive for Bartonella spp. which implies that the coinfection rate between B. burgdorferi and Bartonella spp. is 47.13%. We report one of the highest coinfection rates for B. burgdorferi and Bartonella spp. in I. scapularis, consistent with the current trends of increasing tick presence in North America.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.001
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Case report · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.768
Threshold uncertainty score0.460

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.001
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0010.000
Science and technology studies0.0010.001
Scholarly communication0.0010.000
Open science0.0000.001
Research integrity0.0010.000
Insufficient payload (model declined to judge)0.0010.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.038
GPT teacher head0.358
Teacher spread0.320 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designCase report
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations2
Published2021
Admission routes4
Has abstractyes

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